annotate rxlr_venn_workflow.ga @ 5:4726b640f221 draft default tip

Uploaded revision to update the citation
author peterjc
date Fri, 25 Oct 2013 10:20:46 -0400
parents 3c280e01b920
children
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2 "a_galaxy_workflow": "true",
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4726b640f221 Uploaded revision to update the citation
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3 "annotation": "Takes a protein FASTA file, runs three different RXLR motif methods, draws a Venn diagram comparing them, and creates a FASTA file of those proteins passing all three screens.<br />\n<br />\nThis workflow is <a href=\"http://toolshed.g2.bx.psu.edu/view/peterjc/rxlr_venn_workflow\" target=\"_blank\">available on the Galaxy Tool Shed</a> with a README file giving more information including sample data, and full citation details (Cock and Pritchard 2014).",
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455 "RenameDatasetActionoutput_pos": {
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
456 "action_arguments": {
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
457 "newname": "RXLR by all 3 methods"
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
458 },
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
459 "action_type": "RenameDatasetAction",
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
460 "output_name": "output_pos"
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
461 }
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
462 },
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
463 "tool_errors": null,
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
464 "tool_id": "seq_filter_by_id",
4
3c280e01b920 Uploaded v0.0.2, bump tool version numbers to fix warning about Filter1 parameter, adding link to Tool Shed in annotation. No functional changes.
peterjc
parents: 0
diff changeset
465 "tool_state": "{\"__page__\": 0, \"output_choice_cond\": \"{\\\"output_choice\\\": \\\"pos\\\", \\\"__current_case__\\\": 1}\", \"input_file\": \"null\", \"__rerun_remap_job_id__\": null, \"input_tabular\": \"null\", \"chromInfo\": \"\\\"/opt/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\", \"columns\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": [\\\"1\\\"]}\"}",
0
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
466 "tool_version": "0.0.5",
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
467 "type": "tool",
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
468 "user_outputs": []
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
469 }
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
470 }
0e7c07ff11f9 Uploaded v0.0.1, includes README file and dependencies.
peterjc
parents:
diff changeset
471 }