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view test-data/SRR639755_sample_by_coord.sam @ 0:1d773da0ccf0 draft

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Uploaded v0.0.2, fixed some error messages
author peterjc
date Tue, 27 Jan 2015 08:31:13 -0500
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@HD	VN:1.0	SO:coordinate
@SQ	SN:gi|187250362|ref|NC_010642.1|	LN:16990
@PG	ID:clc_mapper	VN:4.10.86742	CL:clc_mapper -d -z xxx -p fb ss 1 1000 -q yyy -o temp_job.cas --cpus 8
@RG	ID:RG_0	DS:yyy	PG:clc_mapper
SRR639755.6451003	99	gi|187250362|ref|NC_010642.1|	1352	255	7S94M	=	1604	353	ATATCTGCAGTTAACATAAAAATATAGCACGAAAGTAACTTTAATATCTCCGACCACACGATAGCTAAGACCCAAACTGGGATTAGATACCCCGCTATGCT	<?7A4ADDFHHDHIIBH<HGDHEIG>HBHGGEFH@?D<GDGGHDGGG>DDDFGFHGHGIGB;CEH>A>DEEC?B;;=@CC9;;?CCCCCCC@<9>5<<@A4	RG:Z:RG_0	MD:Z:8G8C22T2T42A7	NM:i:11
SRR639755.6451003	147	gi|187250362|ref|NC_010642.1|	1604	255	101M	=	1352	353	TTCAGCCTACATACCGCCATCTTCAGCAAACCCTAAAAAGGAAGAAAAGTAAGCACAAGTGCCTTAACACAAAAAAGTTAGGTCAAGGTGTAGCCCATGAG	>?BA::3B:C?98B@@CC>CA>EEEFFFBCEE>FJJIHC@DDGIIIHF@HFHCFBHD@GGHBFD@HHBDGAFCCEC8HEIHDH>HEHBHHFGHDDD=F@@@	RG:Z:RG_0	MD:Z:9T50AT7T31	NM:i:4
SRR639755.6035319	137	gi|187250362|ref|NC_010642.1|	9094	255	101M	*	0	0	TACTTATGTCTCTCATTTTATTTATTGGGCCAACAAATCTGCTAGGTCTACTACCTCACTCATTTACTCCAACTACGCAATTATCAATAAAACTAGGCATA	?@@FD;:+AHB4<C9F4HEFH@EAA?EE++<<A@FHADDB<?:4D)0*0?D?BFFGIIIDBE:=BDE)=FHGED>;('(5,;;;6;6;>;>(5((5?C(,:	RG:Z:RG_0	MD:Z:29T46C14C9	NM:i:3
SRR639755.2301126	137	gi|187250362|ref|NC_010642.1|	9117	255	101M	*	0	0	ATTGGGTCAACAAATCTGCTAGGTCTACTACCTCACTCATTTACTCCAACTACCCAATTATCAATAAACCTAGGCATAGCCATCCCCTTGTGAGCCGGCAC	?@BDB;=AAAAFFDHBGAAHI>;<AFCAF@?GEDEEFHAHFH@<F<D@GGEHIEF@HIE>GH=B@CCGAHC@@DEHHFEHDFFFFDDE>?CCDACCBDB@B	RG:Z:RG_0	MD:Z:101	NM:i:0
SRR639755.6955680	89	gi|187250362|ref|NC_010642.1|	9285	255	97M4S	*	0	0	GTCCCCTTAATCCCTATGCTCGTAATTATCGAAACTATCAGCCTTTTTATCCAGCCCGTAGCCCTAGCCGTACGACTCACAGCTAATATTACTGCAGATAT	9<>8CAACC?CBC@DDD@?<8A@>(BBC?DDAB;?C@BFFEEAIIHD@EGF6GGGGAFD?B8GCEJJIIHEIIHEGIHHIJJIEGIGGDHFFC=2FFFBB?	RG:Z:RG_0	MD:Z:97	NM:i:0
SRR639755.7076397	89	gi|187250362|ref|NC_010642.1|	9285	255	97M4S	*	0	0	GTCCCCTTAATCCCTATGCTCGTAATTATCGAAACTATCAGCCTTTTTATCCAGCCCGTAGCCCTAGCCGTACGACTCACAGCTAATATTACTGCAGATAT	BBDBCDDCDDCDDCDCBDDD@CACC@DFBDDEB>DFFFFFHHHJJJIGGDJIIGJJIIHGIJJJIJIJIIHGIJIJIJJJJJJJJJJJHHHFC=2FFD?@=	RG:Z:RG_0	MD:Z:97	NM:i:0
SRR639755.2301126	69	*	0	255	*	gi|187250362|ref|NC_010642.1|	9117	0	ATATCTGCAGTGAGCCTGACTTGGGGCTCGAACTCATGAACCATGAGATCATGACCTGAGCTGAAGTCGTACGGCTAGGGCTACGGGCTGGATAAAAAGGC	+1=BDDDDHHHFBF?GDECFGHDEFH@?C:?F@;DH@4B?9)?<BF?=)8C@G=88CC@EHICHH>7=;?;?><A>=A;?(<?9'2-<>B91(>@@CC5?<	RG:Z:RG_0
SRR639755.6035319	69	*	0	255	*	gi|187250362|ref|NC_010642.1|	9094	0	ATATCTGCAGTAATATTAGCTGTGAGTCGTACGGCTAGGGCCACGGGCTGGGTAGCAACGATGCTGGGGTGCAGAATTAGGCGGCTGGGCATTAAAGCGAC	1:;44222222<ABDGG@I?4CFD<ACBG?8ACF@0???B9)0)7A0<@8'().()).(,(.5,((-,',,(((,,(((++(0&&0&&(((+((((+()(&	RG:Z:RG_0
SRR639755.6955680	165	*	0	255	*	gi|187250362|ref|NC_010642.1|	9285	0	CCGACTGAGCCACCCAGGCGCCCCTAAATTTGCTTTTAATTTTAATGGTGGTTATATTTATTGGGGCAACAAATCTGCTAGGTCTACTACCTCACTCATTT	@@BFFADDF?FHHJAE:A@GEHHGHGGIGGE9DCHHHIJIIIG@GGBGHID';=7C==@:=.=CH64<?(;?B>35>@:@>9,::@>;5><A>:<:>9444	RG:Z:RG_0
SRR639755.7076397	165	*	0	255	*	gi|187250362|ref|NC_010642.1|	9285	0	TGACAGCACATTTATTTACAAACTGGTTTGCTGAATATTTTAATCCCACTGTTGAGGCCTACTACCTCACTCATTTACTCCAACTACCCAATTATCAATAA	CC@FFFFFHFHHHJJJJJJIJJJJJIFHGIIIJIIGEGIJJJJIJIHIJHIJIIJJIIIJJJJJJJIJJJJIJJJJGHHGHGFFFFFEDCDDDDDD;>;AC	RG:Z:RG_0