Mercurial > repos > peterjc > seq_primer_clip
comparison tools/seq_primer_clip/README.rst @ 3:708ce1e5ac94 draft
Uploaded v0.0.11, corrected automated dependency definition
author | peterjc |
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date | Thu, 21 Nov 2013 10:47:23 -0500 |
parents | ee5acea162a7 |
children | 9b074c1db68e |
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2:ee5acea162a7 | 3:708ce1e5ac94 |
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59 - Use reStructuredText for this README file. | 59 - Use reStructuredText for this README file. |
60 - Adopted standard MIT licence. | 60 - Adopted standard MIT licence. |
61 - Automated installation of Biopython dependency. | 61 - Automated installation of Biopython dependency. |
62 - Development moved to GitHub, https://github.com/peterjc/pico_galaxy | 62 - Development moved to GitHub, https://github.com/peterjc/pico_galaxy |
63 - Renamed folder and adopted README.rst naming. | 63 - Renamed folder and adopted README.rst naming. |
64 v0.0.11 - Correct automated dependency definition. | |
64 ======= ====================================================================== | 65 ======= ====================================================================== |
65 | 66 |
66 | 67 |
67 Developers | 68 Developers |
68 ========== | 69 ========== |
75 https://github.com/peterjc/pico_galaxy | 76 https://github.com/peterjc/pico_galaxy |
76 | 77 |
77 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use | 78 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use |
78 the following command from the Galaxy root folder:: | 79 the following command from the Galaxy root folder:: |
79 | 80 |
80 $ tar -czf seq_primer_clip.tar.gz tools/seq_primer_clip/README.rst tools/seq_primer_clip/seq_primer_clip.* tools/seq_primer_clip/repository_dependencies.xml test-data/dop_primers.fasta test-data/MID4_GLZRM4E04_rnd30* | 81 $ tar -czf seq_primer_clip.tar.gz tools/seq_primer_clip/README.rst tools/seq_primer_clip/seq_primer_clip.* tools/seq_primer_clip/tool_dependencies.xml test-data/dop_primers.fasta test-data/MID4_GLZRM4E04_rnd30* |
81 | 82 |
82 Check this worked:: | 83 Check this worked:: |
83 | 84 |
84 $ tar -tzf seq_primer_clip.tar.gz | 85 $ tar -tzf seq_primer_clip.tar.gz |
85 tools/seq_primer_clip/README.rst | 86 tools/seq_primer_clip/README.rst |
86 tools/seq_primer_clip/seq_primer_clip.xml | 87 tools/seq_primer_clip/seq_primer_clip.xml |
87 tools/seq_primer_clip/seq_primer_clip.py | 88 tools/seq_primer_clip/seq_primer_clip.py |
88 tools/seq_primer_clip/repository_dependencies.xml | 89 tools/seq_primer_clip/tool_dependencies.xml |
89 test-data/dop_primers.fasta | 90 test-data/dop_primers.fasta |
90 test-data/MID4_GLZRM4E04_rnd30.fasta | 91 test-data/MID4_GLZRM4E04_rnd30.fasta |
91 test-data/MID4_GLZRM4E04_rnd30.fastqsanger | 92 test-data/MID4_GLZRM4E04_rnd30.fastqsanger |
92 test-data/MID4_GLZRM4E04_rnd30_fclip.fasta | 93 test-data/MID4_GLZRM4E04_rnd30_fclip.fasta |
93 test-data/MID4_GLZRM4E04_rnd30_fclip.fastqsanger | 94 test-data/MID4_GLZRM4E04_rnd30_fclip.fastqsanger |