Mercurial > repos > peterjc > seq_select_by_id

comparison tools/seq_select_by_id/README.rst @ 5:1a83f5ab9e95 draft

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Uploaded v0.0.8, corrected automated dependency definition
author peterjc
date Thu, 21 Nov 2013 04:54:59 -0500
parents 6842c0c7bc70
children 91f55ee8fea5
comparison
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4:6842c0c7bc70 5:1a83f5ab9e95
71 - Adopt standard MIT License. 71 - Adopt standard MIT License.
72 v0.0.7 - Updated citation information (Cock et al. 2013). 72 v0.0.7 - Updated citation information (Cock et al. 2013).
73 - Fixed Biopython dependency setup. 73 - Fixed Biopython dependency setup.
74 - Development moved to GitHub, https://github.com/peterjc/pico_galaxy 74 - Development moved to GitHub, https://github.com/peterjc/pico_galaxy
75 - Renamed folder and adopted README.rst naming. 75 - Renamed folder and adopted README.rst naming.
76 v0.0.8 - Corrected automated dependency definition
76 ======= ====================================================================== 77 ======= ======================================================================
77 78
78 79
79 Developers 80 Developers
80 ========== 81 ==========
86 https://github.com/peterjc/pico_galaxy/tree/master/tools 87 https://github.com/peterjc/pico_galaxy/tree/master/tools
87 88
88 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use 89 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use
89 the following command from the Galaxy root folder:: 90 the following command from the Galaxy root folder::
90 91
91 $ tar -czf seq_select_by_id.tar.gz tools/seq_select_by_id/README.rst tools/seq_select_by_id/seq_select_by_id.* tools/seq_select_by_id/repository_dependencies.xml test-data/k12_ten_proteins.fasta test-data/k12_hypothetical.fasta test-data/k12_hypothetical.tabular 92 $ tar -czf seq_select_by_id.tar.gz tools/seq_select_by_id/README.rst tools/seq_select_by_id/seq_select_by_id.* tools/seq_select_by_id/tool_dependencies.xml test-data/k12_ten_proteins.fasta test-data/k12_hypothetical.fasta test-data/k12_hypothetical.tabular
92 93
93 Check this worked:: 94 Check this worked::
94 95
95 $ tar -tzf seq_select_by_id.tar.gz 96 $ tar -tzf seq_select_by_id.tar.gz
96 tools/seq_select_by_id/README.rst 97 tools/seq_select_by_id/README.rst
97 tools/seq_select_by_id/seq_select_by_id.py 98 tools/seq_select_by_id/seq_select_by_id.py
98 tools/seq_select_by_id/seq_select_by_id.xml 99 tools/seq_select_by_id/seq_select_by_id.xml
99 tools/seq_select_by_id/repository_dependencies.xml 100 tools/seq_select_by_id/tool_dependencies.xml
100 test-data/k12_ten_proteins.fasta 101 test-data/k12_ten_proteins.fasta
101 test-data/k12_hypothetical.fasta 102 test-data/k12_hypothetical.fasta
102 test-data/k12_hypothetical.tabular 103 test-data/k12_hypothetical.tabular
103 104
104 105