comparison tools/filters/seq_select_by_id.py @ 2:28d52478ace9 draft

Uploaded v0.0.4 which adds a unit test.

1:50a8a6917a9c

Cock et al 2009. Biopython: freely available Python tools for computational
molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3.
http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878.

This script is copyright 2011-2012 by Peter Cock, The James Hutton Institute UK.
All rights reserved. See accompanying text file for licence details (MIT/BSD
style).

This is version 0.0.3 of the script.
"""
import sys

def stop_err(msg, err=1):
    sys.stderr.write(msg.rstrip() + "\n")
    sys.exit(err)

#Parse Command Line
try:
    tabular_file, col_arg, in_file, seq_format, out_file = sys.argv[1:]
except ValueError:

2:28d52478ace9

Cock et al 2009. Biopython: freely available Python tools for computational
molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3.
http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878.

This script is copyright 2011-2013 by Peter Cock, The James Hutton Institute UK.
All rights reserved. See accompanying text file for licence details (MIT/BSD
style).

This is version 0.0.4 of the script.
"""
import sys

def stop_err(msg, err=1):
    sys.stderr.write(msg.rstrip() + "\n")
    sys.exit(err)

if "-v" in sys.argv or "--version" in sys.argv:
    print "v0.0.4"
    sys.exit(0)

#Parse Command Line
try:
    tabular_file, col_arg, in_file, seq_format, out_file = sys.argv[1:]
except ValueError: