Mercurial > repos > peterjc > seq_select_by_id
comparison tools/seq_select_by_id/README.rst @ 9:3b0a14722175 draft default tip
v0.0.14 - Script works on Python 2 and 3 (fixed output file mode)
| author | peterjc |
|---|---|
| date | Wed, 23 May 2018 09:15:13 -0400 |
| parents | 8e1a90917fa7 |
| children |
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| 8:8e1a90917fa7 | 9:3b0a14722175 |
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| 88 v0.0.12 - Python style changes (internal change only). | 88 v0.0.12 - Python style changes (internal change only). |
| 89 - Use ``<command detect_errors="aggressive">`` (internal change only). | 89 - Use ``<command detect_errors="aggressive">`` (internal change only). |
| 90 - Depends on Biopython 1.67 via legacy Tool Shed package or bioconda. | 90 - Depends on Biopython 1.67 via legacy Tool Shed package or bioconda. |
| 91 - Python 3 compatible print function. | 91 - Python 3 compatible print function. |
| 92 v0.0.13 - Python 3 compatible exception handling. | 92 v0.0.13 - Python 3 compatible exception handling. |
| 93 v0.0.14 - Script works on Python 2 and 3 (fixed output file mode). | |
| 93 ======= ====================================================================== | 94 ======= ====================================================================== |
| 94 | 95 |
| 95 | 96 |
| 96 Developers | 97 Developers |
| 97 ========== | 98 ========== |
| 116 | 117 |
| 117 To just build and check the tar ball, use:: | 118 To just build and check the tar ball, use:: |
| 118 | 119 |
| 119 $ planemo shed_upload --tar_only tools/seq_select_by_id/ | 120 $ planemo shed_upload --tar_only tools/seq_select_by_id/ |
| 120 ... | 121 ... |
| 121 $ tar -tzf shed_upload.tar.gz | 122 $ tar -tzf shed_upload.tar.gz |
| 122 test-data/k12_hypothetical.fasta | 123 test-data/k12_hypothetical.fasta |
| 123 test-data/k12_hypothetical.tabular | 124 test-data/k12_hypothetical.tabular |
| 124 test-data/k12_hypothetical_alt.tabular | 125 test-data/k12_hypothetical_alt.tabular |
| 125 test-data/k12_ten_proteins.fasta | 126 test-data/k12_ten_proteins.fasta |
| 126 tools/seq_select_by_id/README.rst | 127 tools/seq_select_by_id/README.rst |