comparison tools/protein_analysis/seq_analysis_utils.py @ 18:eb6ac44d4b8e draft

Suite v0.2.8, record Promoter 2 verion + misc internal updates

17:e6cc27d182a8

import subprocess
from time import sleep

__version__ = "0.0.1"

def stop_err(msg, error_level=1):
    """Print error message to stdout and quit with given error level."""
    sys.stderr.write("%s\n" % msg)
    sys.exit(error_level)

try:

    try:
        num = int(command_line_arg)
    except:
        num = default
    if num < 1:
        stop_err("Threads argument %r is not a positive integer" % command_line_arg)
    #Cap this with the pysical limit of the machine,
    try:
        num = min(num, cpu_count())
    except NotImplementedError:
        pass

18:eb6ac44d4b8e

import subprocess
from time import sleep

__version__ = "0.0.1"

def sys_exit(msg, error_level=1):
    """Print error message to stdout and quit with given error level."""
    sys.stderr.write("%s\n" % msg)
    sys.exit(error_level)

try:

    try:
        num = int(command_line_arg)
    except:
        num = default
    if num < 1:
        sys_exit("Threads argument %r is not a positive integer" % command_line_arg)
    #Cap this with the pysical limit of the machine,
    try:
        num = min(num, cpu_count())
    except NotImplementedError:
        pass