Mercurial > repos > peterjc > tmhmm_and_signalp

diff tools/protein_analysis/tmhmm2.xml @ 2:6901298ac16c

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Migrated tool version 0.0.5 from old tool shed archive to new tool shed repository
author peterjc
date Tue, 07 Jun 2011 18:04:39 -0400
parents 3ff1dcbb9440
children f3b373a41f81
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--- a/tools/protein_analysis/tmhmm2.xml	Tue Jun 07 18:04:05 2011 -0400
+++ b/tools/protein_analysis/tmhmm2.xml	Tue Jun 07 18:04:39 2011 -0400
@@ -1,4 +1,4 @@
-<tool id="tmhmm2" name="TMHMM 2.0" version="0.0.3">
+<tool id="tmhmm2" name="TMHMM 2.0" version="0.0.5">
     <description>Find transmembrane domains in protein sequences</description>
     <command interpreter="python">
       tmhmm2.py 8 $fasta_file $tabular_file
@@ -52,7 +52,7 @@
 
 **Notes**
 
-The raw output from TMHMM v2.0 looks like this (six columns tab separated):
+The short format output from TMHMM v2.0 looks like this (six columns tab separated, shown here as a table):
 
 =================================== ======= =========== ============= ========= =============================
 gi|2781234|pdb|1JLY|B               len=304 ExpAA=0.01  First60=0.00  PredHel=0 Topology=o