Mercurial > repos > petr-novak > dante_ltr

diff dante_ltr_summary.xml @ 16:7ec262f92d89 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit ba9c740b818bbd5b5a7a5e2afbea827f5bb91419
author petr-novak
date Wed, 10 May 2023 13:07:41 +0000
parents
children d1c3b29b1478
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/dante_ltr_summary.xml	Wed May 10 13:07:41 2023 +0000
@@ -0,0 +1,18 @@
+<tool id="dante_ltr_summary" name="Summarize DANTE_LTR output" version="0.2.2.4" python_template_version="3.5">
+    <requirements>
+        <requirement type="package" version="0.2.2.4">dante_ltr</requirement>
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+        dante_ltr_summary.R -g '$input1' -o output &&
+        mv output.pdf '$output1'
+    ]]></command>
+    <inputs>
+        <param type="data" name="input1" format="gff3" label="GFF3 output from DANTE_LTR" />
+    </inputs>
+    <outputs>
+        <data label="DANTE_LTR summmary from dataset $input1.hid" format="pdf" name="output1" />
+    </outputs>
+    <help><![CDATA[
+        This tool takes GFF3 output from DANTE_LTR and make graphical summary of the results.
+    ]]></help>
+</tool>