Mercurial > repos > petr-novak > long_reads_sampling

changeset 3:9819570dc020 draft

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planemo upload for repository https://github.com/kavonrtep/galaxy_tools commit 5cc98a80e4e99f2b4089b9a8de458035304a6319
author petr-novak
date Fri, 08 Dec 2023 11:24:06 +0000
parents ccaedca97e5e
children 060fc04af21c
files long2short.xml long_reads_sampling.xml
diffstat 2 files changed, 5 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/long2short.xml	Fri Dec 08 09:17:46 2023 +0000
+++ b/long2short.xml	Fri Dec 08 11:24:06 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="long2short" name="Get pseudo short paired end reads from long reads" version="0.1.0">
+<tool id="long2short" name="Get pseudo short paired end reads from long reads" version="0.1.1">
   <requirements>
     <requirement type="package">biopython</requirement>
     <requirement type="package" version="3.6">python</requirement>
--- a/long_reads_sampling.xml	Fri Dec 08 09:17:46 2023 +0000
+++ b/long_reads_sampling.xml	Fri Dec 08 11:24:06 2023 +0000
@@ -1,9 +1,11 @@
-<tool id="long_reads_sampling" name="Create sample of long reads" version="0.1.0">
+<tool id="long_reads_sampling" name="Create sample of long reads" version="0.1.1">
   <requirements>
     <requirement type="package">biopython</requirement>
     <requirement type="package" version="3.6" >python</requirement>
-    <requirement type="literal" path="long2short.py"/>
   </requirements>
+  <required_files>
+    <include type="literal" path="long2short.py"/>
+  </required_files>
   <command detect_errors="exit_code"><![CDATA[
   python3 $__tool_directory__/long_reads_sampling.py -i "$input1" -o "$output1" -l ${total_length} -s ${seed}
   ]]></command>