annotate test_data/classification.csv @ 5:ad3bbf392135 draft

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author petr-novak
date Wed, 26 Jun 2019 11:14:05 -0400
parents a5f1638b73be
children
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1 ATCOPI1_I Ty1/copia AleI/Retrofit
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2 ATCOPIA21I Ty1/copia AleI/Retrofit
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3 ATCOPIA3I Ty1/copia AleI/Retrofit
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4 ATCOPIA47_I Ty1/copia AleI/Retrofit
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5 ATCOPIA4I Ty1/copia AleI/Retrofit
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6 ATCOPIA51_I Ty1/copia AleI/Retrofit
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7 ATCOPIA52_I Ty1/copia AleI/Retrofit
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8 ATCOPIA6I Ty1/copia AleI/Retrofit
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9 ATCOPIA7I Ty1/copia AleI/Retrofit
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10 ATRE1_I Ty1/copia AleI/Retrofit
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11 CASTOR_I Ty1/copia AleI/Retrofit
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12 COP_I_MT Ty1/copia AleI/Retrofit
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13 Copia-17_SB-I Ty1/copia AleI/Retrofit
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14 Copia-26_SB-I Ty1/copia AleI/Retrofit
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15 Copia-44_SB-I Ty1/copia AleI/Retrofit
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16 Copia-46_ZM-I Ty1/copia AleI/Retrofit
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17 Copia-47_ZM-I Ty1/copia AleI/Retrofit
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18 Copia-48_ZM-I Ty1/copia AleI/Retrofit
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19 Copia-50_ZM-I Ty1/copia AleI/Retrofit
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20 Copia-52_ZM-I Ty1/copia AleI/Retrofit
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21 Copia-54_SB-I Ty1/copia AleI/Retrofit
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22 Copia-60_SB-I Ty1/copia AleI/Retrofit
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23 Copia-61_SB-I Ty1/copia AleI/Retrofit
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24 COPIA1_ZM_I Ty1/copia AleI/Retrofit
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25 Copia16-ZM_I Ty1/copia AleI/Retrofit
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26 Copia20-VV_I Ty1/copia AleI/Retrofit
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27 Copia21-PTR_I Ty1/copia AleI/Retrofit
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28 Copia26-ZM_I Ty1/copia AleI/Retrofit
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29 Copia27-ZM_I Ty1/copia AleI/Retrofit
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30 Copia3-ZM_I Ty1/copia AleI/Retrofit
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31 Copia30-PTR_I Ty1/copia AleI/Retrofit
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32 Copia31-ZM_I Ty1/copia AleI/Retrofit
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33 Copia32-ZM_I Ty1/copia AleI/Retrofit
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34 Copia51-PTR_I Ty1/copia AleI/Retrofit
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35 Copia8-ZM_I Ty1/copia AleI/Retrofit
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36 Hopscotch_I Ty1/copia AleI/Retrofit
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37 HOPSCOTCH_ZM-I Ty1/copia AleI/Retrofit
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38 Llorens_Koala_DQ365823.1 Ty1/copia AleI/Retrofit
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39 OSCOPIA2_I Ty1/copia AleI/Retrofit
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40 RETROFIT_I Ty1/copia AleI/Retrofit
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41 RETROFIT2_I Ty1/copia AleI/Retrofit
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42 RETROFIT3_I Ty1/copia AleI/Retrofit
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43 RETROFIT4_I Ty1/copia AleI/Retrofit
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44 SBCOPIA1_I Ty1/copia AleI/Retrofit
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45 SHACOP20_I_MT Ty1/copia AleI/Retrofit
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46 SHACOP3_I_MT Ty1/copia AleI/Retrofit
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47 Wicker_Ale_A_109N23-1 Ty1/copia AleI/Retrofit
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48 Wicker_Ale_B_AF459088-1 Ty1/copia AleI/Retrofit
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49 Wicker_Atara_At-1 Ty1/copia AleI/Retrofit
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50 Wicker_ATCopia4_At-1 Ty1/copia AleI/Retrofit
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51 Wicker_Hopscotch_Os-108 Ty1/copia AleI/Retrofit
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52 Wicker_Hopscotch_Os-110 Ty1/copia AleI/Retrofit
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53 Wicker_Iana_Os-106 Ty1/copia AleI/Retrofit
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54 Wicker_Inav_AY013246-1 Ty1/copia AleI/Retrofit
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55 Wicker_Lilly_Os-110 Ty1/copia AleI/Retrofit
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56 Wicker_Oref_1020F19-1 Ty1/copia AleI/Retrofit
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57 Wicker_Osr12_Os_cons Ty1/copia AleI/Retrofit
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58 Wicker_Retrofit4_Os-101 Ty1/copia AleI/Retrofit
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59 Wicker_rn_126-72_Os Ty1/copia AleI/Retrofit
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60 Wicker_rn_179-105_Os-102 Ty1/copia AleI/Retrofit
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61 Wicker_rn_179-105_Os-104 Ty1/copia AleI/Retrofit
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62 Wicker_rn_25-15_Os-111 Ty1/copia AleI/Retrofit
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63 Wicker_rn_252-146_Os Ty1/copia AleI/Retrofit
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64 Wicker_rn_306-181_Os_cons Ty1/copia AleI/Retrofit
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65 Wicker_rn_414-223_Os-107 Ty1/copia AleI/Retrofit
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66 Wicker_rn_416-225_Os-6 Ty1/copia AleI/Retrofit
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67 Wicker_rn_72-48_Os-1 Ty1/copia AleI/Retrofit
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68 Wicker_rn_74-211_Os-7 Ty1/copia AleI/Retrofit
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69 Wicker_rn_74-211_Os-8 Ty1/copia AleI/Retrofit
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70 Wicker_rn_77-52_Os-9 Ty1/copia AleI/Retrofit
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71 Wicker_Athea_At-101 Ty1/copia AleI/Retrofit
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72 Wicker_Ale_C_AY951944-1 Ty1/copia AleI/Retrofit
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73 Wicker_Athea_At-102 Ty1/copia AleI/Retrofit
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74 Wicker_Lila_Os-109 Ty1/copia AleI/Retrofit
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75 Wicker_Oref_AY368673-1 Ty1/copia AleI/Retrofit
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76 Wicker_rn_14-5_Os-5 Ty1/copia AleI/Retrofit
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77 ATCOPIA11I Ty1/copia AleII
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78 ATCOPIA13I Ty1/copia AleII
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79 ATCOPIA1I Ty1/copia AleII
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80 ATCOPIA22I Ty1/copia AleII
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81 ATCOPIA26I Ty1/copia AleII
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82 ATCOPIA38B_I Ty1/copia AleII
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83 ATCOPIA62_I Ty1/copia AleII
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84 ATCOPIA72_I Ty1/copia AleII
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85 ATCOPIA75_I Ty1/copia AleII
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86 COP10_I_MT Ty1/copia AleII
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87 COP21_I_MT Ty1/copia AleII
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88 Copia-8_SB-I Ty1/copia AleII
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89 Copia15-PTR_I Ty1/copia AleII
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90 Copia23-PTR_I Ty1/copia AleII
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91 Copia3-VV_I Ty1/copia AleII
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92 Copia38-PTR_I Ty1/copia AleII
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93 Copia44-PTR_I Ty1/copia AleII
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94 Copia52-PTR_I Ty1/copia AleII
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95 Llorens_Melmoth_AC007134.10 Ty1/copia AleII
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96 MTCOPIA2_I Ty1/copia AleII
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97 SHACOP11_I_MT Ty1/copia AleII
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98 SHACOP12_I_MT Ty1/copia AleII
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99 SHACOP23_I_MT Ty1/copia AleII
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100 SHACOP6_I_MT Ty1/copia AleII
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101 SHACOP7_I_MT Ty1/copia AleII
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102 Tvv1_I Ty1/copia AleII
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103 Wicker_Alina_At-1 Ty1/copia AleII
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104 Wicker_Ally_Os_cons Ty1/copia AleII
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105 Wicker_Alva_At-101 Ty1/copia AleII
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106 Wicker_ATCopia11_At-110 Ty1/copia AleII
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107 Wicker_ATCopia11_At-116 Ty1/copia AleII
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108 Wicker_ATCopia12_At-102 Ty1/copia AleII
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109 Wicker_ATCopia12_At-3 Ty1/copia AleII
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110 Wicker_ATCopia13_At-106 Ty1/copia AleII
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111 Wicker_ATCopia22_At-109 Ty1/copia AleII
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112 Wicker_ATCopia26_At-103 Ty1/copia AleII
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113 Wicker_ATCopia38B_At-112 Ty1/copia AleII
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114 Wicker_ATCopia70_At-113 Ty1/copia AleII
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115 Wicker_ATCopia75_At-114 Ty1/copia AleII
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116 Wicker_ATCopia83_At-108 Ty1/copia AleII
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117 Wicker_Betsy_Os_cons Ty1/copia AleII
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118 Wicker_Boba_AY494981-1 Ty1/copia AleII
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119 Wicker_Leona_Os_cons Ty1/copia AleII
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120 Wicker_rn_154-162_Os_cons Ty1/copia AleII
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121 Wicker_Brina_Os-105 Ty1/copia AleII
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122 Copia-13_SB-I Ty1/copia Angela
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123 Copia-18_SB-I Ty1/copia Angela
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124 Copia7-ZM_I Ty1/copia Angela
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125 OSTONOR1_I Ty1/copia Angela
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126 RIRE1_I Ty1/copia Angela
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127 Wicker_Adena_Os_cons Ty1/copia Angela
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128 Wicker_Angela_A_cons Ty1/copia Angela
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129 Wicker_Angela_C_AF497474-1 Ty1/copia Angela
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130 Wicker_Anika_At_cons Ty1/copia Angela
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131 Wicker_BARE1_B_cons Ty1/copia Angela
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132 Wicker_BARE1_C_cons Ty1/copia Angela
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133 Wicker_Ikeros_A_102J11-1 Ty1/copia Angela
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134 Wicker_Ostonor1_Os_cons Ty1/copia Angela
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135 Wicker_WIS_B_cons Ty1/copia Angela
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136 Wicker_Angela_B_cons Ty1/copia Angela
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137 Wicker_BARE1_A_cons Ty1/copia Angela
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138 Wicker_BARE2_AJ279072 Ty1/copia Angela
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139 Wicker_WIS_A_cons Ty1/copia Angela
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140 Wicker_WIS_C_294D11-5 Ty1/copia Angela
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141 ATCOPIA27_I Ty1/copia Bianca
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142 Wicker_Beyla_A_Os_cons Ty1/copia Bianca
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143 Wicker_Bianca_AF521177-1 Ty1/copia Bianca
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144 Wicker_RomaniAT5_At-3 Ty1/copia Bianca
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145 ATCOPIA31_I Ty1/copia Ivana/Oryco
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146 ATCOPIA63_I Ty1/copia Ivana/Oryco
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147 ATCOPIA78_I Ty1/copia Ivana/Oryco
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148 COP12_I_MT Ty1/copia Ivana/Oryco
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149 Copia-11_SB-I Ty1/copia Ivana/Oryco
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150 Copia-16_SB-I Ty1/copia Ivana/Oryco
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151 Copia-19_SB-I Ty1/copia Ivana/Oryco
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152 Copia-20_SB-I Ty1/copia Ivana/Oryco
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153 Copia-25_SB-I Ty1/copia Ivana/Oryco
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154 Copia-27_SB-I Ty1/copia Ivana/Oryco
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155 Copia-28_SB-I Ty1/copia Ivana/Oryco
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156 Copia-29_SB-I Ty1/copia Ivana/Oryco
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157 Copia-31_SB-I Ty1/copia Ivana/Oryco
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158 Copia-33_SB-I Ty1/copia Ivana/Oryco
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159 Copia-40_SB-I Ty1/copia Ivana/Oryco
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160 Copia-46_SB-I Ty1/copia Ivana/Oryco
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161 Copia-48_SB-I Ty1/copia Ivana/Oryco
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162 Copia-49_ZM-I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
163 Copia-51_SB-I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
164 Copia-53_ZM-I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
165 Copia-54_ZM-I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
166 Copia-74_SB-I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
167 Copia27-PTR_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
168 Copia37-PTR_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
169 Copia4-ZM_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
170 Copia41-PTR_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
171 CPSC2_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
172 CPSC3_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
173 CPSC4A_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
174 CPSC4B_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
175 GmCOPIA11_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
176 Llorens_Araco_AC079131.4 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
177 Llorens_Oryco1-1_AL928755.5 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
178 Llorens_Oryco1-2_AL606630.3 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
179 Llorens_Poco_AC210386.1 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
180 Llorens_Vitico1-1_AM465428.1 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
181 POPCOP1_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
182 SC-4_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
183 SC-8_I Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
184 SHACOP4_I_MT Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
185 SHACOP8_I_MT Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
186 Wicker_ATCopia78_At_cons Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
187 Wicker_HORPIA_AY661558-1 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
188 Wicker_HORPIA2_cons Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
189 Wicker_Ilona_C_Os_cons Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
190 Wicker_Ivana_102J11-1 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
191 Wicker_Kalia_Os-105 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
192 Wicker_Kasia_102J11-1 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
193 Wicker_Osr4_Os_cons Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
194 Wicker_rn_112-64_Os-101 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
195 Wicker_rn_157-332_Os_103 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
196 Wicker_rn_18-313_Os-101 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
197 Wicker_rn_228-214_Os_cons Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
198 Wicker_rn_374-205_Os-104 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
199 Wicker_rn_503-254_Os-103 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
200 Wicker_rn_89-81_Os-106 Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
201 Wicker_SC3_Os_cons Ty1/copia Ivana/Oryco
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
202 ATCOPIA43I Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
203 COPIA3-I_LC Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
204 ENDOVIR1_I Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
205 SIRE1_INT_ Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
206 Wicker_ATCopia58_At-101 Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
207 Wicker_Barbara_A_210J24-3 Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
208 Wicker_Barbara_B_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
209 Wicker_COPIO_Os_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
210 Wicker_Echidne_Os_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
211 Wicker_Inga_AY661558-2 Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
212 Wicker_Marcus_Os-1 Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
213 Wicker_Maximus_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
214 Wicker_Osr10_Os_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
215 Wicker_Osr8_Os_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
216 Wicker_Osr9_Os_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
217 Wicker_Usier_11O9-1 Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
218 Wicker_ATCopia43_At-1 Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
219 Wicker_Osr8B_Os_cons Ty1/copia Maximus/SIRE
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
220 ATCOPIA95_I Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
221 Copia-38-I_ZM Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
222 Copia-39-I_ZM Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
223 Copia2_ZM_I Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
224 COPIA2-I_OS Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
225 Llorens_Fourf_AF391808.3 Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
226 RIRE5-I_OS Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
227 Wicker_ATCopia95_At-1 Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
228 Wicker_Houba_Os_cons Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
229 Wicker_Osr1_Os_cons Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
230 Wicker_TAR_C_Os6 Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
231 Wicker_TAR1_AF459088-1 Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
232 Wicker_Tara_Os_cons Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
233 ZMCOPIA2_I Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
234 Wicker_TAR2_AY853252-1 Ty1/copia TAR
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
235 ATCOPIA10_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
236 ATCOPIA32_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
237 ATCOPIA49_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
238 ATCOPIA56_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
239 ATCOPIA76_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
240 COPI1_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
241 COPI2_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
242 Copia-31-I_VV Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
243 COPIA3-I_OS Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
244 Copia42-PTR_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
245 Llorens_RTvr2_AY900122.1 Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
246 Llorens_Tork4_EU105455.1 Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
247 Llorens_V12_EU009618.1 Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
248 SHACOP15_I_MT Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
249 TLC1_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
250 TNT1_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
251 TTO1_NT_I Ty1/copia Tork
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
252 Wicker_Leojyg_AY268139-1 Ty1/copia unclass(Ale)
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
253 Wicker_rn_78-53_Os-102 Ty1/copia unclass(Ale)
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
254 Llorens_Vitico1-2_AM462010.2 Ty1/copia unclass(AleI/Retrofit)
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
255 HOBS_I Ty1/copia unclass(Tork)
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
256 Athila_AB005248.1 Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
257 Athila_AF296831.1 Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
258 BAGY2 Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
259 Calypso Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
260 Cyclops Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
261 MEGY Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
262 PIGY-1 Ty3/gypsy Athila
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
263 AraT_ID257 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
264 Beetle1_ID7 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
265 Beetle2_ID78 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
266 Bilby_ID66 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
267 BraR_ID236 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
268 BraR1_ID113 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
269 BraR2_ID120 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
270 BraR3_ID114 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
271 BraR4_ID118 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
272 BraR5_ID117 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
273 BraR6_ID119 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
274 BraR7_ID116 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
275 CarP1_ID79 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
276 Cereba1_ID8 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
277 CRA1_ID6 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
278 CRA2a_ID5 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
279 CRA3a_ID1 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
280 CRA4_ID2 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
281 CRA5_ID121 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
282 CRA6_ID122 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
283 CRM1a_ID25 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
284 CRM2_ID24 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
285 CRM3_ID37 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
286 CRM4_ID30 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
287 CRM5_ID112 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
288 CRR1_ID14 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
289 CRR2_ID16 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
290 CRR3_ID17 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
291 CRR4_ID19 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
292 CRW_ID59 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
293 Galadriel_LycE_ID42 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
294 Gimli_AraT_ID40 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
295 Gloin_AraT_ID210 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
296 GlyM_ID222 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
297 GlyM_ID228 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
298 GlyM_ID230 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
299 GlyM1_ID85 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
300 GlyT_ID221 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
301 GlyT1_ID82 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
302 IpoB1_ID87 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
303 Legolas_AraT_ID39 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
304 LORE1a_LotJ_ID256 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
305 LORE2A_LotJ_ID51 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
306 LORE2B_LotJ_ID52 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
307 LotJ_ID226 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
308 LotJ_ID234 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
309 LotJ1_ID63 Ty3/gypsy chromovirus #domains of this elements are no longer present in the TE_domains_newest.fasta
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
310 LotJ2_ID65 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
311 LotJ3_ID88 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
312 MedT_ID218 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
313 MedT_ID232 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
314 MedT1_ID93 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
315 MedT2_ID89 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
316 MedT3_ID96 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
317 MedT4_ID97 Ty3/gypsy chromovirus #domains of this elements are no longer present in the TE_domains_newest.fasta
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
318 MusA_ID235 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
319 MusA_ID43 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
320 MusA1_ID67 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
321 MusB1_ID98 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
322 OryGl1_ID240 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
323 OryGr1_ID100 Ty3/gypsy chromovirus #domains of this elements are no longer present in the TE_domains_newest.fasta
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
324 OryM1_ID101 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
325 OryM2_ID102 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
326 OryM3_ID103 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
327 OryP1_ID105 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
328 OryP2_ID106 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
329 OryS_ID254 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
330 Peabody_PiSat_ID47 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
331 PetI1_ID72 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
332 PetI2_ID76 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
333 PhyP_ID251 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
334 PiSat1_ID200 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
335 PopT_ID202 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
336 PopT_ID203 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
337 PopT1_ID21 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
338 PopT10_ID168 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
339 PopT11_ID172 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
340 PopT2_ID20 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
341 PopT3_ID196 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
342 PopT4_ID191 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
343 PopT5_ID192 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
344 PopT6_ID188 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
345 PopT7_ID193 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
346 PopT8_ID197 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
347 PopT9_ID194 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
348 Reina_ZeaM_ID49 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
349 Retrosor2_SorB_ID48 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
350 SelM_ID252 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
351 SetI1_ID107 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
352 SilL1_ID241 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
353 SilL2_ID242 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
354 SorB1_ID109 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
355 Tekay_ZeaM_ID50 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
356 ThelH1_ID77 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
357 TriA1_ID110 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
358 VitV_ID211 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
359 VitV_ID214 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
360 VitV_ID215 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
361 VitV1_ID22 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
362 VitV2_ID128 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
363 VitV3_ID124 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
364 VitV4_ID142 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
365 VitV5_ID143 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
366 VitV6_ID131 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
367 LjRE2_ID63 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
368 MedT4_ID246 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
369 OryGr1_ID245 Ty3/gypsy chromovirus
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
370 ATLANTYS_LC_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
371 ATLANTYS-I_OS Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
372 ATLANTYS2_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
373 CALYPSHAN2_I_MT Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
374 Grande1-4 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
375 Gret1_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
376 Gypsy-18_SB-I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
377 Gypsy-22_SB-I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
378 Gypsy-30_SB-I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
379 Gypsy-71-I_ZM Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
380 Gypsy11-ZM_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
381 Gypsy12-ZM_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
382 Gypsy29-ZM_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
383 HUCK1-I_ZM Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
384 Ogre-LE1 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
385 Ogre-MT1A Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
386 Ogre-MT1B Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
387 Ogre-MT1C Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
388 Ogre-MT1D Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
389 Ogre-MT2 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
390 Ogre-MT3 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
391 Ogre-MT4 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
392 Ogre-PS1 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
393 Ogre-PT1 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
394 Ogre-PT2 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
395 Ogre-PT3 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
396 Ogre-SD1 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
397 Ogre-VP1 Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
398 Retand Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
399 RETROSOR1_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
400 RIRE2_I Ty3/gypsy Ogre/Tat
a5f1638b73be Uploaded
petr-novak
parents:
diff changeset
401 Tat4-1 Ty3/gypsy Ogre/Tat