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petr-novak
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profrep
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dependencies/
drwxr-xr-x
domains_data/
drwxr-xr-x
test_data/
drwxr-xr-x
tool-data/
drwxr-xr-x
README.md
21530
-rw-r--r--
configuration.py
4761
-rwxr-xr-x
configuration_for_testing.org
456
-rw-r--r--
contributors.txt
7
-rw-r--r--
dante.py
35803
-rwxr-xr-x
dante.xml
6460
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dante_gff_output_filtering.py
13634
-rwxr-xr-x
dante_gff_output_filtering.xml
5161
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dante_gff_to_dna.py
7640
-rwxr-xr-x
dante_gff_to_dna.xml
3145
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download_profrep_databases.sh
127
-rwxr-xr-x
env.sh
47
-rw-r--r--
extract_data_for_profrep.py
2109
-rwxr-xr-x
extract_data_for_profrep.xml
1246
-rw-r--r--
gff.py
4926
-rwxr-xr-x
gff_select_region.xml
1786
-rw-r--r--
gff_selection.py
3167
-rwxr-xr-x
profrep.py
51907
-rwxr-xr-x
profrep.xml
12121
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profrep_db_reducing.py
12047
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profrep_db_reducing.xml
2659
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profrep_masking.py
2968
-rwxr-xr-x
profrep_masking.xml
1208
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profrep_refine.xml
4432
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profrep_refining.py
19072
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shed.yml
265
-rw-r--r--
testing.sh
2042
-rwxr-xr-x
tool_config_profrep.xml
671
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tool_dependencies.xml
371
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visualization.py
5456
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