# HG changeset patch
# User petr-novak
# Date 1690980128 0
# Node ID 5dba804e68844cba900be8d23c8cd27df1107233
# Parent  b50db133106a729bbfd4dc717b723e7f7f4df59c
planemo upload commit 20bdf879b52796d3fb251a20807191ff02084d3c-dirty

diff -r b50db133106a -r 5dba804e6884 extract_contigs_from_archive.xml
--- a/extract_contigs_from_archive.xml	Wed Aug 02 12:28:39 2023 +0000
+++ b/extract_contigs_from_archive.xml	Wed Aug 02 12:42:08 2023 +0000
@@ -3,6 +3,7 @@
      <![CDATA[
     unzip -p ${RepeatExplorer_archive} contigs.fasta  > ${contigs}
     &&
+    mkdir -p tempdir
     unzip ${RepeatExplorer_archive} "*.aln" -d tempdir
     &&
     find tempdir -type f -name "*.aln" -exec cat {} + > ${aln}