Mercurial > repos > petr-novak > repeatexplorer2_testing
comparison repex_full_clustering.xml @ 8:3b744b24ce50 draft
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author | petr-novak |
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date | Mon, 10 Jul 2023 09:30:19 +0000 |
parents | ffe53359f758 |
children | 319156f85093 |
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7:ffe53359f758 | 8:3b744b24ce50 |
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36 echo "STDERR CONTENT:" >> ${log}; | 36 echo "STDERR CONTENT:" >> ${log}; |
37 cat stderr.log >> ${log} && | 37 cat stderr.log >> ${log} && |
38 /opt/repex_tarean/stderr_filter.py stderr.log && | 38 /opt/repex_tarean/stderr_filter.py stderr.log && |
39 cd tarean_output && | 39 cd tarean_output && |
40 zip -r ${ReportArchive}.zip * && | 40 zip -r ${ReportArchive}.zip * && |
41 mv ${ReportArchive}.zip ${ReportArchive} && | 41 mv -p ${ReportArchive}.zip ${ReportArchive} && |
42 cp index.html ${ReportFile} && | 42 cp index.html ${ReportFile} && |
43 mkdir ${ReportFile.files_path} && | 43 mkdir ${ReportFile.files_path} && |
44 cp -r --parents libdir ${ReportFile.files_path} && | 44 cp -r --parents libdir ${ReportFile.files_path} && |
45 cp -r --parents seqclust/clustering/superclusters ${ReportFile.files_path} && | 45 cp -r --parents seqclust/clustering/superclusters ${ReportFile.files_path} && |
46 cp -r --parents seqclust/clustering/clusters ${ReportFile.files_path} && | 46 cp -r --parents seqclust/clustering/clusters ${ReportFile.files_path} && |