Mercurial > repos > petr-novak > repeatexplorer2_testing

diff repex_full_clustering.xml @ 9:319156f85093 draft

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author petr-novak
date Mon, 10 Jul 2023 10:22:18 +0000
parents 3b744b24ce50
children 3c121bee9253
line wrap: on
line diff
--- a/repex_full_clustering.xml	Mon Jul 10 09:30:19 2023 +0000
+++ b/repex_full_clustering.xml	Mon Jul 10 10:22:18 2023 +0000
@@ -38,9 +38,9 @@
       /opt/repex_tarean/stderr_filter.py stderr.log &&
       cd tarean_output &&
       zip -r  ${ReportArchive}.zip * &&
-      mv -p ${ReportArchive}.zip ${ReportArchive} &&
+      mv  ${ReportArchive}.zip ${ReportArchive} &&
       cp index.html ${ReportFile} &&
-      mkdir ${ReportFile.files_path} &&
+      mkdir -p ${ReportFile.files_path} &&
       cp -r --parents libdir ${ReportFile.files_path} &&
       cp -r --parents seqclust/clustering/superclusters ${ReportFile.files_path} &&
       cp -r --parents seqclust/clustering/clusters ${ReportFile.files_path} &&