diff tidecluster.xml @ 10:971dbc97e607 draft default tip

planemo upload for repository https://github.com/kavonrtep/galaxy_packages commit 5269b4297ea690bce0802c3c1cb217f24290f1ec-dirty

--- a/tidecluster.xml	Tue Nov 28 14:31:07 2023 +0000
+++ b/tidecluster.xml	Fri Mar 08 13:16:45 2024 +0000
@@ -22,12 +22,19 @@
         &&
         cp tidecluster_clustering.gff3 '$gff3_clustering'
         &&
-        if [ -f tidecluster_tarean_report.html ]; then cp tidecluster_tarean_report.html '$tarean_report'; fi
+        if [ -f tidecluster_index.html ]; then cp tidecluster_index.html '$tarean_report'; fi
         &&
         mkdir -p ${tarean_report.extra_files_path}
         &&
         if [ -d tidecluster_tarean ]; then cp -r tidecluster_tarean ${tarean_report.extra_files_path}/; fi
         &&
+        if [ -d tidecluster_kite ]; then cp -r tidecluster_kite ${tarean_report.extra_files_path}/; fi
+        &&
+        if [ -f tidecluster_kite_report.html ]; then cp  tidecluster_kite_report.html ${tarean_report.extra_files_path}/; fi
+        &&
+        if [ -f tidecluster_tarean_report.html ]; then cp  tidecluster_tarean_report.html ${tarean_report.extra_files_path}/; fi
+
+        &&
         if [ -f tidecluster_consensus_dimer_library.fasta ]; then cp tidecluster_consensus_dimer_library.fasta ${trc_library}; fi
         &&
         zip -r output.zip *