annotate masscomb_file_splitter.xml @ 7:33899d82fbc1

New feature
author pieter.lukasse@wur.nl
date Mon, 27 Jan 2014 09:47:22 +0100
parents 2864d8797260
children 153e9eb5f2ff
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
6
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
1 <tool name="File Splitter" id="masscomb_filesplitter" version="0.0.1">
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
2 <description>Basic file splitting</description>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
3 <!--
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
4 For remote debugging start you listener on port 8000 and use the following as command interpreter:
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
5 java -jar -Xdebug -Xrunjdwp:transport=dt_socket,address=D0100564.wurnet.nl:8000
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
6 -->
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
7 <command interpreter="java -jar">
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
8 MassComb.jar
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
9 -action FILESPLITTER
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
10 -inputFile $inputFile
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
11 -outputFile $outputFile
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
12 -splitExpression $splitExpression
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
13 -nameExpression $nameExpression
7
33899d82fbc1 New feature
pieter.lukasse@wur.nl
parents: 6
diff changeset
14 -extension $extension
6
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
15 </command>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
16 <inputs>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
17 <param name="inputFile" type="data" format="" label="Input file to split"/>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
18
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
19 <param name="splitExpression" type="select" label="(regular)Expression to split on" help="">
7
33899d82fbc1 New feature
pieter.lukasse@wur.nl
parents: 6
diff changeset
20 <option value="^>.+">line start with &gt;alphanumeric (^&gt;.+)</option>
6
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
21 </param>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
22 <param name="nameExpression" type="select" label="(regular)Expression for file name" help="">
7
33899d82fbc1 New feature
pieter.lukasse@wur.nl
parents: 6
diff changeset
23 <option value="SLASHw+">alphanumeric part (\w)</option>
6
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
24 </param>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
25
7
33899d82fbc1 New feature
pieter.lukasse@wur.nl
parents: 6
diff changeset
26 <param name="extension" type="text" size="30" label="File extension for the 'sub-files'" value=".txt" help=""/>
6
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
27
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
28 </inputs>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
29 <outputs>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
30 <data format="prims.fileset.zip" name="outputFile" />
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
31 </outputs>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
32 <tests>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
33 <test>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
34 </test>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
35 </tests>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
36 <help>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
37
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
38 </help>
2864d8797260 new experimental tool
pieter.lukasse@wur.nl
parents:
diff changeset
39 </tool>