comparison msclust.xml @ 30:60b53f2aa48a

Small fixes, added microminutes support to MsClust, removed TIC or MsClust output

29:0d534bce8e84

        	-peakIntensityCorrectionAlgorithm CORRELATION_BASED
        #end if
	    
	</command>
	<inputs>
	<!--  <param name="rankingWeightConfig" type="text" area="true" size="11x70" label="NB - TEST VERSION" 
value="VERSION BEING TESTED AT THIS MOMENT...NOT READY FOR USE..."/>
	-->
	 	<param name="inputPeaks" type="data" format="txt" label="Ion-wise aligned data (e.g. MetAlign output data)" />
		<param name="dataType" type="select" size="30" label="Data type">
				<option value="gcms"  selected="true">GC-MS</option>
				<option value="lcms">LC-MS</option>
			</param>

.. image:: msclust_summary.png 


-----

**Output**

This tools returns a number of ouptut files and a small report. 

**Parameters index**

30:60b53f2aa48a

        	-peakIntensityCorrectionAlgorithm CORRELATION_BASED
        #end if
	    
	</command>
	<inputs>

	 	<param name="inputPeaks" type="data" format="txt" label="Ion-wise aligned data (e.g. MetAlign output data)" />
		<param name="dataType" type="select" size="30" label="Data type">
				<option value="gcms"  selected="true">GC-MS</option>
				<option value="lcms">LC-MS</option>
			</param>

.. image:: msclust_summary.png 


-----

**Input**

The input file should contain the following columns (in this order), followed by the sample intensity columns (one column with the
intensity value for each sample):

*ScanNR	
*Ret(umin)	
*Mass(uD)	
*(Optional)retentionMean
*(only required if retentionMean is present)retentionSD
*N sample intensity columns...

-----

**Output**

This tools returns a number of ouptut files and a small report. 

**Parameters index**