comparison test/test_library_lookup.py @ 30:60b53f2aa48a

Small fixes, added microminutes support to MsClust, removed TIC or MsClust output

29:0d534bce8e84

        '''
        Tests the match_library.py functionality
        '''
        riqc_libs_dir = resource_filename(__name__, "../repositories/PRIMS-metabolomics/RI_DB_libraries")
        get_library_files_output = match_library.get_directory_files(riqc_libs_dir)
        self.assertEqual(1, len(get_library_files_output))
        self.assertEqual("Library_RI_DB_capillary_columns-noDuplicates", get_library_files_output[0][0])
        #TODO change assert below to assert that the result is a file, so the test can run on other dirs as well:
        #self.assertEqual("E:\\workspace\\PRIMS-metabolomics\\python-tools\\tools\\GCMS\\test\\data\\riqc_libs\\RI DB library (capillary columns) Dec.2012.txt", get_library_files_output[0][1])
        #self.assertEqual("RI DB library (capillary columns) Jan.2013", get_library_files_output[1][0])  
        try:

30:60b53f2aa48a

        '''
        Tests the match_library.py functionality
        '''
        riqc_libs_dir = resource_filename(__name__, "../repositories/PRIMS-metabolomics/RI_DB_libraries")
        get_library_files_output = match_library.get_directory_files(riqc_libs_dir)
        self.assertEqual(2, len(get_library_files_output))
        self.assertEqual("Library_RI_DB_capillary_columns-noDuplicates", get_library_files_output[0][0])
        #TODO change assert below to assert that the result is a file, so the test can run on other dirs as well:
        #self.assertEqual("E:\\workspace\\PRIMS-metabolomics\\python-tools\\tools\\GCMS\\test\\data\\riqc_libs\\RI DB library (capillary columns) Dec.2012.txt", get_library_files_output[0][1])
        #self.assertEqual("RI DB library (capillary columns) Jan.2013", get_library_files_output[1][0])  
        try: