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comparison msclust.xml @ 13:b9815233960f

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workaround for pop-up images
author pieter.lukasse@wur.nl
date Tue, 21 Jan 2014 16:47:35 +0100
parents a18e0a7b0d26
children 4c5ba34c8c1c
comparison
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12:a18e0a7b0d26 13:b9815233960f
235 values = stricter separation at the value determined in 'Potential Density reduction' above 235 values = stricter separation at the value determined in 'Potential Density reduction' above
236 (TODO review this comment). 236 (TODO review this comment).
237 237
238 *Stop Criterion:* When to stop reducing and looking for new clusters. Lower values = more iterations 238 *Stop Criterion:* When to stop reducing and looking for new clusters. Lower values = more iterations
239 239
240 .. __: javascript:window.open('confidence_and_slope_params_explain.png','popUpWindow','height=700,width=800,left=10,top=10,resizable=yes,scrollbars=yes,toolbar=yes,menubar=no,location=no,directories=no,status=yes') 240 .. __: javascript:window.open('.. image:: confidence_and_slope_params_explain.png'.replace('.. image:: ', ''),'popUpWindow','height=700,width=800,left=10,top=10,resizable=yes,scrollbars=yes,toolbar=yes,menubar=no,location=no,directories=no,status=yes')
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242 242
243 ----- 243 -----
244 244
245 **Output files described below** 245 **Output files described below**
248 248
249 *SPECTRA:* this file can be submitted to NIST for identification of the spectra. 249 *SPECTRA:* this file can be submitted to NIST for identification of the spectra.
250 250
251 `Click here for more details on the Sample selection and Spectrum peak intensity correction algorithm parameters related to SPECTRA generation`_ 251 `Click here for more details on the Sample selection and Spectrum peak intensity correction algorithm parameters related to SPECTRA generation`_
252 252
253 .. _Click here for more details on the Sample selection and Spectrum peak intensity correction algorithm parameters related to SPECTRA generation: javascript:window.open('sample_sel_and_peak_height_correction.png','popUpWindow','height=700,width=800,left=10,top=10,resizable=yes,scrollbars=yes,toolbar=yes,menubar=no,location=no,directories=no,status=yes') 253 .. _Click here for more details on the Sample selection and Spectrum peak intensity correction algorithm parameters related to SPECTRA generation: javascript:window.open('".. image:: sample_sel_and_peak_height_correction.png'.replace('.. image:: ', ''),'popUpWindow','height=700,width=800,left=10,top=10,resizable=yes,scrollbars=yes,toolbar=yes,menubar=no,location=no,directories=no,status=yes')
254 254
255 ----- 255 -----
256 256
257 *MIC:* stands for Measured Ions Count -> it contains, for each cluster, the sum of the ion count 257 *MIC:* stands for Measured Ions Count -> it contains, for each cluster, the sum of the ion count
258 values (corrected by their membership) for all MEASURED cluster ions in the given sample. 258 values (corrected by their membership) for all MEASURED cluster ions in the given sample.