Mercurial > repos > pieterlukasse > prims_metabolomics

diff rankfilterGCMS_tabular.xml @ 21:19d8fd10248e

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* Added interface to METEXP data store, including tool to fire queries in batch mode * Improved quantification output files of MsClust, a.o. sorting mass list based on intensity (last two columns of quantification files) * Added Molecular Mass calculation method
author pieter.lukasse@wur.nl
date Wed, 05 Mar 2014 17:20:11 +0100
parents 24fb75fedee0
children
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--- a/rankfilterGCMS_tabular.xml	Tue Feb 11 12:29:50 2014 +0100
+++ b/rankfilterGCMS_tabular.xml	Wed Mar 05 17:20:11 2014 +0100
@@ -3,7 +3,7 @@
   <command interpreter="python">rankfilter_GCMS/rankfilter.py $input_file</command>
   <inputs>
     <param format="tabular" name="sample" type="data" label="Sample File" 
-	       help="Converted PDF file in tabular format" />
+	       help="Select a tab delimited NIST metabolite identifications file (converted from PDF)" />
 	<!-- question: is this calibration file not column specific as it includes RT info?? -->
     <!-- this one should be input file for now:<param name="calibration"  type="select" label="Calibration File" 
            help="Calibration file with reference masses (e.g. alkanes) with their RT and RI values"