Mercurial > repos > pieterlukasse > prims_metabolomics

changeset 20:24fb75fedee0

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Made calibration file configurable at UI.
author pieter.lukasse@wur.nl
date Tue, 11 Feb 2014 12:29:50 +0100
parents c068ed713eb9
children 19d8fd10248e
files rankfilterGCMS_tabular.xml
diffstat 1 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/rankfilterGCMS_tabular.xml	Fri Jan 31 12:21:51 2014 +0100
+++ b/rankfilterGCMS_tabular.xml	Tue Feb 11 12:29:50 2014 +0100
@@ -5,9 +5,12 @@
     <param format="tabular" name="sample" type="data" label="Sample File" 
 	       help="Converted PDF file in tabular format" />
 	<!-- question: is this calibration file not column specific as it includes RT info?? -->
-    <param name="calibration"  type="select" label="Calibration File" 
+    <!-- this one should be input file for now:<param name="calibration"  type="select" label="Calibration File" 
            help="Calibration file with reference masses (e.g. alkanes) with their RT and RI values"
     		dynamic_options='get_directory_files("tool-data/shared/PRIMS-metabolomics/RankFilter_Calibration_Files")'/>
+    		-->
+    <param name="calibration" format="any" type="data" label="Calibration File" 
+           help="Calibration file containing reference masses (e.g. alkanes) with their respective RT and RI values"/>
 
     <param name="analysis_type" type="select" format="text" label="Analysis Type"
     	   help="Select the type of analysis that has been used to generate the sample file">