adding lib png and other options
| author |
pieter.lukasse@wur.nl |
| date |
Fri, 07 Nov 2014 12:04:54 +0100 |
| parents |
e6171a39dd04 |
| children |
0b8516e10ae3 |
| rev |
line source |
|
1
|
1 # get R http://cran.r-project.org/src/base/R-3/R-3.0.3.tar.gz
|
|
0
|
2
|
|
|
3 # installs Bioconductor
|
|
|
4 source("http://bioconductor.org/biocLite.R")
|
|
|
5 biocLite()
|
|
|
6
|
|
2
|
7 # upgrade? Some packages are "old" and can be upgraded with: biocLite("BiocUpgrade")
|
|
0
|
8
|
|
|
9
|
|
|
10 # install metaMS and multtest for differential analysis tool (from xcms)
|
|
|
11 biocLite("metaMS")
|
|
|
12 biocLite("multtest")
|
|
|
13
|
|
|
14 # for "multi-threading" (actually starts multiple R processes for parallel processing):
|
|
|
15 install.packages("snow", repos="http://cran.rstudio.com/")
|
|
|
16
|
