Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

annotate tool_dependencies.xml @ 4:86a12d75ebe4 draft default tip

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planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 7be61b7ed35ca3deaad68d2eae384c8cd365bcb8
author pjbriggs
date Fri, 20 Dec 2019 06:59:49 -0500
parents 3ab198df8f3f
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3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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1 <?xml version="1.0"?>
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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2 <tool_dependency>
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86a12d75ebe4 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 7be61b7ed35ca3deaad68d2eae384c8cd365bcb8
pjbriggs
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3 <package name="amplicon_analysis_pipeline" version="1.3.6">
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3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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4 <install version="1.0">
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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5 <actions>
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86a12d75ebe4 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 7be61b7ed35ca3deaad68d2eae384c8cd365bcb8
pjbriggs
parents: 3
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6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/master/install_amplicon_analysis-1.3.6.sh</action>
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3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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7 <action type="shell_command">
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86a12d75ebe4 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 7be61b7ed35ca3deaad68d2eae384c8cd365bcb8
pjbriggs
parents: 3
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8 sh ./install_amplicon_analysis-1.3.6.sh $INSTALL_DIR
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3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
parents:
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9 </action>
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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10 <action type="set_environment">
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86a12d75ebe4 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 7be61b7ed35ca3deaad68d2eae384c8cd365bcb8
pjbriggs
parents: 3
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11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.3.6/bin</environment_variable>
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3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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12 </action>
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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13 </actions>
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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14 </install>
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
parents:
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15 </package>
3ab198df8f3f planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 15390f18b91d838880d952eb2714f689bbd8a042
pjbriggs
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16 </tool_dependency>