Mercurial > repos > pjbriggs > ceas

annotate tool-data/ceas.loc.sample @ 3:df54f8fcc7a7 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Version 1.0.2-3: move to conda-based dependency resolution.
author pjbriggs
date Wed, 28 Feb 2018 10:22:32 -0500
parents f411ce97a351
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
1 #This is a sample file distributed with Galaxy that is used by the
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
2 #ceas tool. The ceas.loc file has this format (white space
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
3 #characters are TAB characters):
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
4 #
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
5 #<unique_build> <dbkey> <Description> <PathToGdbFile>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
6 #
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
7 #For example:
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
8 #
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
9 #hg18_illumina_pe hg18 Human (hg18) /home/galaxy/genomes/ceaslib/GeneTable/hg18
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
10 #mm9_generic mm9 Mouse (mm9) /home/galaxy/genomes/ceaslib/GeneTable/mm9
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
11 #...etc...
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
12 #
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
13 # The GDB files are sqlite databases containing the RefSeq genes for
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
14 # the organism in question
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
15 #
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
16 #This file should be placed in galaxy's tool-data directory when the
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
17 #ceas tool is installed.