annotate data_manager_conf.xml @ 4:cd6a48ffd093 draft default tip

Uploaded version 1.0.2-4.
author pjbriggs
date Wed, 26 Sep 2018 08:03:10 -0400
parents f411ce97a351
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
1 <?xml version="1.0"?>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
2 <data_managers>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
3 <data_manager tool_file="data_manager/data_manager_ceas_fetch_annotations.xml" id="ceas_fetch_annotations">
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
4 <data_table name="ceas_annotations">
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
5 <output>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
6 <column name="value" />
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
7 <column name="dbkey" />
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
8 <column name="name" />
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
9 <column name="path" output_ref="out_file" >
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
10 <move type="file">
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
11 <source>${path}</source>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ceas/${dbkey}/${path}</target>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
13 </move>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/ceas/${dbkey}/${path}</value_translation>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
15 <value_translation type="function">abspath</value_translation>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
16 </column>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
17 </output>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
18 </data_table>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
19 </data_manager>
f411ce97a351 Uploaded initial version 1.0.2-2
pjbriggs
parents:
diff changeset
20 </data_managers>