diff test-data/test_MACS2.1.0_peaks.xls @ 0:06cb587a5e87 draft

Uploaded initial version 2.1.0-4.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_MACS2.1.0_peaks.xls	Tue Jun 30 08:16:18 2015 -0400
@@ -0,0 +1,29 @@
+#peaks file
+# This file is generated by MACS version 2.1.0.20140616
+# Command line: callpeak -t /home/pjb/BCF_Work/galaxies/test/galaxy-dist/database/files/000/dataset_46.dat -c /home/pjb/BCF_Work/galaxies/test/galaxy-dist/database/files/000/dataset_45.dat --format=BED --name=test_MACS2.1.0 --bw=300 --gsize=775000000.0 --nomodel --extsize=243 --qvalue=0.05 -B --SPMR --mfold 5 50 --keep-dup 1
+# ARGUMENTS LIST:
+# name = test_MACS2.1.0
+# format = BED
+# ChIP-seq file = ['/home/pjb/BCF_Work/galaxies/test/galaxy-dist/database/files/000/dataset_46.dat']
+# control file = ['/home/pjb/BCF_Work/galaxies/test/galaxy-dist/database/files/000/dataset_45.dat']
+# effective genome size = 7.75e+08
+# band width = 300
+# model fold = [5, 50]
+# qvalue cutoff = 5.00e-02
+# Larger dataset will be scaled towards smaller dataset.
+# Range for calculating regional lambda is: 1000 bps and 10000 bps
+# Broad region calling is off
+# MACS will save fragment pileup signal per million reads
+
+# tag size is determined as 50 bps
+# total tags in treatment: 50
+# tags after filtering in treatment: 50
+# maximum duplicate tags at the same position in treatment = 1
+# Redundant rate in treatment: 0.00
+# total tags in control: 50
+# tags after filtering in control: 50
+# maximum duplicate tags at the same position in control = 1
+# Redundant rate in control: 0.00
+# d = 243
+#chr	start	end	length	abs_summit	pileup	-log10(pvalue)	fold_enrichment	-log10(qvalue)	name
+chr26	4118914	4119282	369	4119130	9.00	9.13132	6.31632	2.51561	test_MACS2.1.0_peak_1