Mercurial > repos > pjbriggs > rnachipintegrator

comparison README.rst @ 1:5f69a2c1b9c9 draft

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Uploaded version 1.0.0.0.
author pjbriggs
date Wed, 24 Feb 2016 09:39:14 -0500
parents d9c1f2133124
children dc498b03ca9a
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0:d9c1f2133124 1:5f69a2c1b9c9
88 ===================================== 88 =====================================
89 89
90 RnaChipIntegrator produces an Excel spreadsheet as one of its outputs, 90 RnaChipIntegrator produces an Excel spreadsheet as one of its outputs,
91 however Galaxy is not currently set up by default to handle these. 91 however Galaxy is not currently set up by default to handle these.
92 92
93 To enable Excel output file handling in Galaxy, edit the ``datatypes_conf.xml`` 93 To enable Excel (XLS) output file handling in Galaxy, edit the
94 file and add: 94 ``datatypes_conf.xml`` file and add:
95 95
96 <datatype extension="xls" type="galaxy.datatypes.data:Data" mimetype="application/vnd.ms-excel" /> 96 <datatype extension="xlsx" type="galaxy.datatypes.binary:Binary" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
97
98 You'll also need to remove the existing datatype with extension "xls".
99 97
100 Restarting Galaxy should mean that the browser correctly handles Excel outputs 98 Restarting Galaxy should mean that the browser correctly handles Excel outputs
101 from RnaChipIntegrator. 99 from RnaChipIntegrator.
102 100
103 History 101 History
104 ======= 102 =======
105 103
106 ========== ====================================================================== 104 ========== ======================================================================
107 Version Changes 105 Version Changes
108 ---------- ---------------------------------------------------------------------- 106 ---------- ----------------------------------------------------------------------
107 1.0.0.0 - Update to use latest ``RnaChipIntegrator`` version 1.0.0.
108 0.5.0-0 - Significant update to bring tools in line with
109 ``RnaChipIntegrator`` version 0.5.0, including removing the
110 distinction between 'regions' and 'summits' for input peaks,
111 and otherwise attempting to simplify the tools for users.
109 0.4.4-0 - Initial version pushed to toolshed 112 0.4.4-0 - Initial version pushed to toolshed
110 ========== ====================================================================== 113 ========== ======================================================================
111 114
112 115
113 Developers 116 Developers