Mercurial > repos > pjbriggs > trimmomatic

annotate test-data/trimmomatic_pe_r2_paired_out1.fastq @ 0:3358c3d30143 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded initial version.
author pjbriggs
date Mon, 01 Dec 2014 10:40:07 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
1 @MISEQ:1:000000000-A2Y1L:1:1101:19264:2433 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
2 GCCGATATGCAGATGCCGTTGATTGCTGCCAGCATAGCAGCCATTGCCGGCATATCCTTTGTGACTGTGCGCCGACGCAAGAAGGCGGCCCAGATAACCTAGCCCAGAAACGATACGGCGTCTCTACCCTCATCTGTTATGCTGATCCAGTGATTCTTGCCTACCTTCTTTACGGTGATGTAATGCCAGTCGTTGGCAAG
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
3 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
4 ??A??ABBDDDDDDDDFFEEEFHIIIIHHIIHIFHIIHHHFHHIIIIIHHHFHHIIIIIIFFFHHIIHGDEHHAAEHHHHFHHHHD=EBBEEEEEFFFFEEEECEFFEEFFF8*??AA?;>DEEEFFFF*?8AECFEFFFFFFEAEEECFFFCEEEFFFFFFEEFEACEEC?CAACEFEEEFE?0?EACAAAEEAACEEA
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
5 @MISEQ:1:000000000-A2Y1L:1:1101:18667:2435 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
6 GATGACATCAGCACAGGTTCCGCTTCCGCTGTCGCAACGACGTGGCTGCCATCGATTATATTCAATTCTGAGTGCTGCCGTAGGGCTAGATGTAAGACTCACGTTCGGCGACCAGATTAGTCGGTAGTGGCATG
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
7 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
8 ?????BBBDDDDDDDDGFFGGGHHHHIHHHHHHHIHHHHIHBCEEHFFHHHIIHFHHHIIIIIIIHIFBGFGFHHHHIHE@EEEHHFFHHFF?CFHHHHHGGGGGGGGGGGGGGGGGGGECGGG;EE:CEGGG?
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
9 @MISEQ:1:000000000-A2Y1L:1:1101:17523:2436 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
10 GAATATAGAAACGGGAGTATAGTGGTAACC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
11 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
12 ??AAABBBDDDDDEDDGGCFGGHHIFFHHH
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
13 @MISEQ:1:000000000-A2Y1L:1:1101:15489:2437 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
14 GTCCACGTGAAATCCCGAGCGTCCCTCTCCCTCCCGAGAACCCGGTCTATATCCCACGATTTTTGACCGAACAAGGATTGACCTCATCCAACTCCGAAGCCCGCC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
15 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
16 ????9B???AD9?BDDEEDDDDHHHHHFHFHFFHHHHHHHHHEHH>CEGHHFGHHGHH=FHHHHC+CGEBCC<CF@,4CF@CFBFFFFDF?B4BD@@D)>CE6BB
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
17 @MISEQ:1:000000000-A2Y1L:1:1101:18851:2442 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
18 TCTCCTCAGTACGGGGGAGGAGGTTCGCTCGGCGGACGTGCGGCCCTACGCCAGACTCTACCACATGGTTCAGCAGGAGCTGGAGCACCGCGCTGTGTCCGGGGACTGGGAATACACCATCAGCCCCGGCGAGGAGTGGCAAGAGACGGA
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
19 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
20 A??A?BBBDDDDDDDDGGGGGGHEFHHGEHHHIHEHHHHHDHBEHGFFFEGGDEEDGGGGGEGGEECE?EGCEGEGGGCEEEGGCEEGG4D;;4AGGGGGG8>GGA?EGGGEEGEEGGGCGGEGEGGGGD8<AADECECEGG?CCC:8CC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
21 @MISEQ:1:000000000-A2Y1L:1:1101:15290:2442 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
22 GCGTGGATTTGATTCGGTTTATGGGGCGCGGCCGCTGAGGCGGGTCATTCAGACGGAGATT
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
23 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
24 ?????@?BDDDDDDDDFEEEFFHIIHEHHHHDHHHHHEHHHHHH8ADFFFDFFD1D;>1,;
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
25 @MISEQ:1:000000000-A2Y1L:1:1101:15892:2446 2:N:0:NAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
26 GTATTGCTGGCACCATCAGTCACCGTGTAGTGTATTCTATCGATTCCGTCACGCTGGCCCTTGAGCGTGCCCGAATCATACGTTATGGTGGTACCTGATACCGTGGCACTAGTGCCGTCGGTGTCTGCGCCATCCGTACGGTCGAACACCACCACGAGGGTATCGGCG
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
27 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
28 ?????BBBDDDDDDDDGGGGGGIIHIIFHHHIHHIFHGHGGHHIHIIDEFFHEF@DFHIIHIIIGHACDCFFHHHIHIIHIHGHHHBGFGEEHHHHFHFFHHDFDCEGGFGGFGGG@DBEEEEGC>CEEGGGGGGE0?CDGGGD>EE2CE8CEGEE<>>>):CEEGDA
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
29 @MISEQ:1:000000000-A2Y1L:1:1101:17903:2450 2:N:0:TAAGGCGATAGATCGC
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
30 GGCCAACACTGTGGTCACTATCTCTGGCACTGGTCTGCTACCACATGGAGTTGACACCGGAGACCCAATCACCACAGCAACAGTGTGGATTGACCACACCCCCTGCACCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAG
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
31 +
3358c3d30143 Uploaded initial version.
pjbriggs
parents:
diff changeset
32 55<?????DDDBBDDBFFFFFFCHHIIHHIIIIIIIHGHHIIIIHHGHIIHFHHIIIIHHHCDHIIIHFFHIIIIICFFHIHECGCGEHIH=FHHHHHHHHHHF;FFFFFDDFFFFFFFEFFFFEFEBDFAEEAEE@EEDD>DDD880:?