trimmomatic: test-data/trimmomatic_avgqual.fastq annotate

annotate test-data/trimmomatic_avgqual.fastq @ 11:59054f086eca draft

Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)

author	pjbriggs
date	Fri, 05 Oct 2018 05:19:17 -0400
parents	14d05f2d511d
children

rev	line source
4 14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	1 @MISEQ:1:000000000-A2Y1L:1:1101:18667:2435 1:N:0:NAAGGCGATAGATCGC
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	2 ATATATTCATCCGCCATTATNAGAGTCCGATTACTTTAGAACAGTGCCGCGAATCCTTCGTCAACTGTAATCCAAGCGACATTGGTTCGATTAGCACGCATGAGGCACGAGATCTACGCGTATCTCTGGTAGATACACCAGGAGGGATGAGAGTTGAGCGAGTTAGCTGTGGCCAGAGAGATGGGTCTAATCGTAGTCTACAACTGGGAGTCACATGCCACTACCGACTAATCTGGTCGCCGAACGGGAG
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	3 +
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	4 ?????BBBDDDDADDDE@FF#66CFCFHHBEHHIIIHIIHHFHHGHHHHHHHHHHIHIHIFHHHHHHEGFHIHHIIIHHHHHHHHCFHHHHHHHFFFFFFEEEEFFEFEEBBEEEFFE@E8;EEFFFEF:AEEEEEFFFEAAEA?A?ACAEF?CEEFED2<.?AAECEAEFEEE8??A8?CAAE1?EEE?AE888AEEEEFEEFFA8A8?ACEAEEEAE?C:??ED2<E:C:?:8?ED<>8.)8?<
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	5 @MISEQ:1:000000000-A2Y1L:1:1101:15290:2442 1:N:0:NAAGGCGATAGATCGC
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	6 AAAATAATCCTAAAAAATAACCTCTATGCCGCCGAACGCTCCGCCTCTATCTTCGTAAAAACTATCTTCTCCTCCTCACCTCCATAATCAAGCATCAAGCGATCGCCCTCCGCCAACTCACCCCGCAAAATCTTATCCGCTAGCGGATTCTCAATCTCCGTCTGAATGACCCGCCTCAGCGGCCGCGCCCCATAAACCGAATCAAATCCACGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAA
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	7 +
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	8 ?????BBBDDDDDDDDGGGGGGIIIHHFFHHHHHHHHHHEHHEHHHHHIIHHHHHFEHIIIHHIHHIHIHIIIIIHHHHHHHHHHHHHHHHDHHHHHHHHGEDFGGGGGGG;CEGEGCEGGGGG8>GGGGEGGEECEGGGGD8EDGGAEGEEGGCE:CGG8CEEGG???CEE<DG8CC??>DG.8<AGGGGCEEGC2<GCCECE:?CE?CE9C:C:C:?C1*010:?E82'2<GCE########
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	9 @MISEQ:1:000000000-A2Y1L:1:1101:18106:2444 1:N:0:NAAGGCGATAGATCGC
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	10 GTAGTATTCTCATATCACAAGTCCCCAAACTGCATAAGGTGTGGAGTGGAGTGTCTCCCACTGCATTTTGTTGGTTTGGGTTGCATTTTTTGTGGCACAAAATTATCTTTAAACACTCTAAGCTCATATTTGCACATGCAACATGAATTGGAGCATTTCTTTTGCAGTCAACTGCCAGTACATTAACTCCACTCTGTAATAGTAAATCCTGTCTCTTATCCACATCTCCGAGCCCACGAGAATAAGGCGA
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	11 +
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	12 55,,5?9BBBBB<<BBFFFFFFFHHFBEFHFHHHFDFCF0A9@>9D9DFG;FHHHHGHHFFFFHHHHECDCEFF>EFEEEE@CDFEFHHGHHHHEHDGHHFHDFHFHHHHFFHHH@FDD??DFFFFDBBEEBEEEEEEEEEEEEEEEEE,;?CEC;CEEEECB?CEEEEEEEECEEE?C?CE0?*/:::?:/?:A::*/::ACE?0:::A::**00::/?C888??EEE#############
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	13 @MISEQ:1:000000000-A2Y1L:1:1101:15892:2446 1:N:0:NAAGGCGATAGATCGC
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	14 CTTCCCCACGGCCCAGACACAAGAGACGACCTCCATAAATCTTTTAGAGGGTGACCGCATCTCCGACGCAAACCAGGACGCCGATACCCTCGTGGTGGTGTTCGACCGTACGGATGGCGCAGACACCGACGGCACTAGTGCCACGGTATCAGGTACCACCATAACGTATGATTCGGGCACGCTCAAGGGCCAGCGTGACGGAATCGATAGAATACACTACACGGTGACTGATGGGGCCAGCCAAACCTGT
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	15 +
14d05f2d511d Version that supports Trimmomatic 0.36. pjbriggs parents: diff changeset	16 ?????BBBDBDDDDDDFFFFFFHIHIHHHHHHIHIFGGHFHHHHIIFHIHH?EEGHHHHHH-EGEHHCEHHHHH@FDFFEFF5@EEEFFEFE;AECCE;AEEEEEA?8?AEDDEEDFFDE2>>EEFF<<<2>D?DEEE:C?AA<>8AEFCEE:?C?EEE?CEFEE0?:E?ACEECD8>EE>)8>E:CEEEEEED.)?AE??A?:A???:C0?CCE?AAA:88.88?::C:C?*8)4A?A#########