Mercurial > repos > pjbriggs > trimmomatic

comparison trimmomatic.xml @ 9:53af7b5b1b56 draft

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Uploaded
author pjbriggs
date Mon, 21 Aug 2017 04:59:09 -0400
parents 415a165d92bb
children dfa082f84068
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8:415a165d92bb 9:53af7b5b1b56
112 <param name="fastq_in" type="data" format="fastqsanger,fastqsanger.gz" label="Input FASTQ file" /> 112 <param name="fastq_in" type="data" format="fastqsanger,fastqsanger.gz" label="Input FASTQ file" />
113 </when> 113 </when>
114 <when value="pair_of_files"> 114 <when value="pair_of_files">
115 <param name="fastq_r1_in" type="data" format="fastqsanger,fastqsanger.gz" 115 <param name="fastq_r1_in" type="data" format="fastqsanger,fastqsanger.gz"
116 label="Input FASTQ file (R1/first of pair)" /> 116 label="Input FASTQ file (R1/first of pair)" />
117 <param name="fastq_r2_in" type="data" format="fastqsanger,fastqgsanger.gz" 117 <param name="fastq_r2_in" type="data" format="fastqsanger,fastqsanger.gz"
118 label="Input FASTQ file (R2/second of pair)" /> 118 label="Input FASTQ file (R2/second of pair)" />
119 </when> 119 </when>
120 <when value="collection"> 120 <when value="collection">
121 <param name="fastq_pair" format="fastqsanger,fastqsanger.gz" type="data_collection" collection_type="paired" label="Select FASTQ dataset collection with R1/R2 pair" /> 121 <param name="fastq_pair" format="fastqsanger,fastqsanger.gz" type="data_collection" collection_type="paired" label="Select FASTQ dataset collection with R1/R2 pair" />
122 </when> 122 </when>