Mercurial > repos > pjbriggs > trimmomatic

diff test-data/trimmomatic_se_out1.err @ 11:59054f086eca draft

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Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
author pjbriggs
date Fri, 05 Oct 2018 05:19:17 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/trimmomatic_se_out1.err	Fri Oct 05 05:19:17 2018 -0400
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+TrimmomaticSE: Started with arguments:
+ -threads 1 fastq_in.fastqsanger fastq_out.fastqsanger SLIDINGWINDOW:4:20 -trimlog trimlog
+Quality encoding detected as phred33
+Input Reads: 10 Surviving: 8 (80.00%) Dropped: 2 (20.00%)
+TrimmomaticSE: Completed successfully