view test-data/weeder2_motifs.out @ 1:571cb77ab9e7 draft

Add citation tag and README file.
author pjbriggs
date Tue, 09 Dec 2014 11:27:19 -0500
parents 496bc4eff47e
children
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COMMAND LINE:

weeder2 -f weeder_in.fa -chipseq -sim 0.95 -O MM 

MOTIFS SUMMARY:

1)	GTTTCAATTA	(TAATTGAAAC)	2.38
2)	CATTTTAA	(TTAAAATG)	2.082
3)	GTGAATTA	(TAATTCAC)	1.969
4)	TCAATCAT	(ATGATTGA)	1.944
5)	TGTTTAAT	(ATTAAACA)	1.874
6)	ATTACT	(AGTAAT)	1.823
7)	TCACAT	(ATGTGA)	1.8
8)	TACATT	(AATGTA)	1.773
9)	TTGACA	(TGTCAA)	1.733
10)	AATAAT	(ATTATT)	1.714
11)	ATGACT	(AGTCAT)	1.702
12)	TTGAAA	(TTTCAA)	1.693
13)	ATTTTA	(TAAAAT)	1.691
14)	TAAACA	(TGTTTA)	1.685
15)	ATGATT	(AATCAT)	1.678
16)	AGTATT	(AATACT)	1.664
17)	TTGAGT	(ACTCAA)	1.574
18)	TAAAAC	(GTTTTA)	1.572
19)	GTGAAT	(ATTCAC)	1.568
20)	AATACA	(TGTATT)	1.564


DETAILED RESULTS:

1)	GTTTCAATTA	(TAATTGAAAC)	2.38

Matrix: MAT1	GTTTCAATTA
A	0.1739	0.08497	0.1198	0.1538	0.186	0.8184	0.6871	0.09156	0.1002	0.7403	
C	0.06162	0.05256	0.05743	0.07398	0.5592	0.08087	0.0987	0.08757	0.149	0.08036	
G	0.591	0.06033	0.07754	0.07127	0.1033	0.0563	0.08422	0.04673	0.08862	0.06081	
T	0.1735	0.8021	0.7452	0.701	0.1515	0.04446	0.1299	0.7741	0.6622	0.1185	

OCCURRENCES:
>chr1:8797248-879744	35	GTTTCAATTA	1	174	+
>chr1:3467418-346761	1	TTTTCAATTA	0.934855	187	-
>chr1:5072821-507302	8	GTTTGAATTA	0.928879	153	-
>chr1:9932599-993279	45	GTTTCAATCA	0.919923	124	+
>chr1:9013525-901372	37	GTTTCACTTA	0.908195	51	+
>chr1:9956513-995671	48	GTTTCCATTA	0.88494	114	-
>chr1:9813405-981360	44	TTTTAAATTA	0.876639	141	+
>chr1:7768736-776893	34	ATTTTAATTA	0.871314	131	-
>chr1:9956513-995671	48	ATTTCAATCA	0.854845	177	-
>chr1:7444756-744495	33	GTTTAAATGA	0.852292	99	+
>chr1:7386917-738711	29	TTTACAATTA	0.849485	45	+
>chr1:7303541-730374	27	GTTTTAATGA	0.8469	8	-
>chr1:5805347-580554	10	GTTCAAATTA	0.843965	178	-
>chr1:7768736-776893	34	GTATTAATTA	0.83883	127	+
>chr1:6588721-658892	21	GTTGTAATTA	0.83815	138	+
>chr1:7388025-738822	30	CTTTCAATCA	0.83733	1	+
>chr1:9962925-996312	49	GTCTAAATTA	0.834485	190	-
>chr1:4562216-456241	4	ATTTCAACTA	0.827808	147	+
>chr1:6878570-687877	25	GTTTTGATTA	0.817499	91	-
>chr1:6396504-639670	18	GTTTCATTTT	0.816051	171	+
>chr1:7768736-776893	34	GTTTCATCTA	0.805952	147	+
>chr1:9460371-946057	38	GTATCAATTT	0.805422	84	+
>chr1:6721868-672206	23	GTTTCAGATA	0.799444	28	-
>chr1:6090845-609104	11	TTTTTAATCA	0.79117	168	-
>chr1:9948240-994844	47	GTTTCAACTC	0.789921	109	-
>chr1:6266967-626716	15	GCTCCAATTA	0.785236	145	-
>chr1:5072821-507302	8	GTTTAATTCA	0.774774	150	+
>chr1:6090845-609104	11	ATTGTAATTA	0.773071	87	+
>chr1:8851545-885174	36	TTTTGACTTA	0.771928	49	-
>chr1:6878570-687877	25	ATTACAATCA	0.769475	34	-
>chr1:6090845-609104	11	GTTAAAATGA	0.766922	148	-
>chr1:4662531-466273	5	GTTTTACTCA	0.764511	34	-
>chr1:4562216-456241	4	GTTGAAATCA	0.763465	145	-
>chr1:6090845-609104	11	ATTACAATAA	0.761859	85	-
>chr1:9013525-901372	37	GTTTAAGTAA	0.760027	162	+
>chr1:6205539-620573	13	GTTAAAATTT	0.7594	156	+
>chr1:7413722-741392	32	TTTTCATTGA	0.758428	125	-
>chr1:9932599-993279	45	GTTTGATTAA	0.754251	45	-
>chr1:6588721-658892	21	TTATCAATAA	0.749598	145	+
>chr1:6205539-620573	13	GTATAAATTT	0.747207	160	-
>chr1:4774948-477514	6	TTTACAATTC	0.74652	118	-
>chr1:4833767-483396	7	GGTTAAATCA	0.745976	183	+
>chr1:6588721-658892	21	ATTACAACTA	0.742438	136	-
>chr1:9948240-994844	47	GTTGAAACTA	0.736427	111	+
>chr1:4833767-483396	7	ATTACAAGTA	0.736066	103	-
>chr1:9574131-957433	42	ATTACCATTA	0.734492	157	-
>chr1:6721868-672206	23	AATTCAGTTA	0.728969	72	+
>chr1:4774948-477514	6	GATCTAATTA	0.726685	11	-
>chr1:6266967-626716	15	ATTTCAACTC	0.724842	175	+
>chr1:4833767-483396	7	GTAACGATTA	0.698174	62	-
**********

2)	CATTTTAA	(TTAAAATG)	2.082

Matrix: MAT2	CATTTTAA
A	0.216	0.8128	0.1075	0.04678	0.1112	0.1399	0.7346	0.7969	
C	0.5444	0.04193	0.0509	0.03932	0.0429	0.08711	0.1099	0.09147	
G	0.1067	0.03289	0.07156	0.0785	0.0966	0.09202	0.05706	0.0382	
T	0.1328	0.1124	0.77	0.8354	0.7493	0.681	0.09836	0.0734	

OCCURRENCES:
>chr1:9813405-981360	44	CATTTTAA	1	131	-
>chr1:7768736-776893	34	CATTTTAA	1	134	-
>chr1:7388801-738900	31	CATTTTAA	1	62	+
>chr1:6205539-620573	13	CATTTTAA	1	28	-
>chr1:6090845-609104	11	CATTTTAA	1	149	+
>chr1:3467418-346761	1	CATTTTAA	1	182	+
>chr1:9942670-994287	46	AATTTTAA	0.939956	134	-
>chr1:9013525-901372	37	AATTTTAA	0.939956	112	-
>chr1:6205539-620573	13	AATTTTAA	0.939956	157	-
>chr1:8851545-885174	36	TATTTTAA	0.924741	103	-
>chr1:6262414-626261	14	TATTTTAA	0.924741	183	+
>chr1:7386917-738711	29	GATTTTAA	0.919973	30	-
>chr1:6266967-626716	15	GATTTTAA	0.919973	2	-
>chr1:5072821-507302	8	GATTTTAA	0.919973	114	-
>chr1:7444756-744495	33	CATTTAAA	0.901069	100	-
>chr1:9932599-993279	45	CATTTGAA	0.892317	175	-
>chr1:6266967-626716	15	CATTTCAA	0.891418	174	+
>chr1:6750817-675101	24	CATTTTCA	0.885779	154	-
>chr1:6090845-609104	11	CATTTTCA	0.885779	5	+
>chr1:5168670-516887	9	CATTTTCA	0.885779	26	-
>chr1:6360131-636033	17	CATTTTTA	0.883664	135	+
>chr1:9948240-994844	47	CATTATAA	0.883344	56	-
>chr1:5805347-580554	10	CATTGTAA	0.880668	126	-
>chr1:9948240-994844	47	CAATTTAA	0.878877	16	+
>chr1:9942670-994287	46	CAATTTAA	0.878877	130	+
>chr1:6090845-609104	11	CAATTTAA	0.878877	122	+
>chr1:6396504-639670	18	CATTTTGA	0.876113	175	+
>chr1:9013525-901372	37	CAGTTTAA	0.872299	108	+
>chr1:6266967-626716	15	CTTTTTAA	0.871938	44	-
>chr1:6262414-626261	14	CTTTTTAA	0.871938	187	-
>chr1:6090845-609104	11	CTTTTTAA	0.871938	171	-
>chr1:4774948-477514	6	CATTCTAA	0.870849	60	+
>chr1:6090845-609104	11	CACTTTAA	0.868521	126	-
>chr1:8797248-879744	35	CATTTTAT	0.867711	146	-
>chr1:4024990-402519	2	CATTTTAG	0.861275	117	-
>chr1:8851545-885174	36	AATTTGAA	0.832272	183	-
>chr1:5805347-580554	10	AATTTGAA	0.832272	179	+
>chr1:9956513-995671	48	AATTTCAA	0.831373	180	-
>chr1:6588721-658892	21	AATTTCAA	0.831373	101	-
>chr1:3467418-346761	1	AATTTTCA	0.825735	191	-
>chr1:7386917-738711	29	AATTGTAA	0.820624	46	-
>chr1:4774948-477514	6	AATTGTAA	0.820624	119	+
>chr1:9956513-995671	48	AATTTTAC	0.810972	184	+
>chr1:7413722-741392	32	AATTTTAC	0.810972	10	+
>chr1:6472202-647240	20	AATTTTAC	0.810972	32	+
>chr1:6090845-609104	11	TATTGTAA	0.805409	86	+
>chr1:9554705-955490	40	AATGTTAA	0.801568	46	+
>chr1:8851545-885174	36	AATGTTAA	0.801568	99	+
>chr1:6878570-687877	25	GATTGTAA	0.800641	35	+
>chr1:7444756-744495	33	CATTATAC	0.75436	70	-
**********

3)	GTGAATTA	(TAATTCAC)	1.969

Matrix: MAT3	GTGAATTA
A	0.2434	0.0588	0.09038	0.7708	0.7064	0.0692	0.08129	0.7448	
C	0.08343	0.02873	0.1008	0.06039	0.0821	0.07782	0.09324	0.09242	
G	0.5181	0.06202	0.6983	0.08538	0.05523	0.08203	0.1107	0.09517	
T	0.1551	0.8504	0.1106	0.08347	0.1562	0.7709	0.7148	0.0676	

OCCURRENCES:
>chr1:6266967-626716	15	GTGAATTA	1	15	+
>chr1:8851545-885174	36	ATGAATTA	0.94756	84	-
>chr1:6437830-643803	19	ATGAATTA	0.94756	128	-
>chr1:5072821-507302	8	TTGAATTA	0.930703	153	-
>chr1:6878570-687877	25	CTGAATTA	0.917022	85	+
>chr1:6721868-672206	23	CTGAATTA	0.917022	71	-
>chr1:9568576-956877	41	GTGATTTA	0.89497	22	+
>chr1:4833767-483396	7	GTGATTTA	0.89497	186	-
>chr1:6262414-626261	14	GTGAATGA	0.884673	174	+
>chr1:4402453-440265	3	GTGAATCA	0.881343	131	-
>chr1:6437830-643803	19	GTGAATAA	0.879062	123	+
>chr1:9956513-995671	48	GTGAATTG	0.875981	77	-
>chr1:6878570-687877	25	GTGAATTG	0.875981	53	+
>chr1:6277750-627795	16	GTGAATTC	0.875456	27	-
>chr1:7768736-776893	34	GTGGATTA	0.86916	11	+
>chr1:6721868-672206	23	GTGGATTA	0.86916	168	+
>chr1:3467418-346761	1	GTGTATTA	0.868795	4	-
>chr1:7209035-720923	26	GTGAAGTA	0.868484	12	-
>chr1:6183701-618390	12	GTGAACTA	0.867682	60	+
>chr1:4024990-402519	2	GTGAACTA	0.867682	97	-
>chr1:6396504-639670	18	GGGAATTA	0.849489	51	+
>chr1:7768736-776893	34	ATTAATTA	0.835366	129	+
>chr1:9978791-997899	50	ATAAATTA	0.831511	27	+
>chr1:7768736-776893	34	ATAAATTA	0.831511	104	+
>chr1:6183701-618390	12	ATGAATCA	0.828904	71	+
>chr1:5072821-507302	8	ATGAATCA	0.828904	85	-
>chr1:9932599-993279	45	ATGACTTA	0.828376	12	-
>chr1:9574131-957433	42	ATGACTTA	0.828376	55	+
>chr1:5072821-507302	8	ATGAATAA	0.826623	21	+
>chr1:9574131-957433	42	TTGATTTA	0.825673	145	-
>chr1:8797248-879744	35	TTGATTTA	0.825673	7	+
>chr1:8797248-879744	35	TTCAATTA	0.816637	176	+
>chr1:3467418-346761	1	TTCAATTA	0.816637	187	-
>chr1:7768736-776893	34	ATGTATTA	0.816356	125	+
>chr1:5072821-507302	8	ATGTATTA	0.816356	42	+
>chr1:3467418-346761	1	ATGTATTA	0.816356	26	-
>chr1:9568576-956877	41	ATGAAGTA	0.816044	150	+
>chr1:6721868-672206	23	TTGAATGA	0.815376	85	+
>chr1:7209035-720923	26	ATGAACTA	0.815242	42	+
>chr1:6878570-687877	25	ATGCATTA	0.81195	43	-
>chr1:8851545-885174	36	TTGACTTA	0.811518	49	-
>chr1:9942670-994287	46	TTGAATTG	0.806684	162	+
>chr1:6090845-609104	11	TTGCATTA	0.795092	39	+
>chr1:6719561-671976	22	ACGAATTA	0.790695	71	-
>chr1:9942670-994287	46	GTCATTTA	0.780905	11	-
>chr1:6472202-647240	20	GTCATTTA	0.780905	144	+
>chr1:9956513-995671	48	GTGATTGA	0.779643	176	+
>chr1:9932599-993279	45	GTGATTGA	0.779643	127	-
>chr1:4774948-477514	6	GTGATCTA	0.762652	15	-
>chr1:6205539-620573	13	GTCTATTA	0.75473	143	+
**********

4)	TCAATCAT	(ATGATTGA)	1.944

Matrix: MAT4	TCAATCAT
A	0.05132	0.186	0.8183	0.6756	0.1425	0.08545	0.8726	0.1838	
C	0.02852	0.5378	0.07891	0.05957	0.02786	0.6724	0.03639	0.1337	
G	0.0695	0.1008	0.02175	0.09712	0.07326	0.07966	0.0383	0.06208	
T	0.8507	0.1753	0.08099	0.1677	0.7564	0.1625	0.05268	0.6204	

OCCURRENCES:
>chr1:8851545-885174	36	TCAATCAT	1	120	+
>chr1:7444756-744495	33	TCAATCAT	1	11	+
>chr1:9013525-901372	37	TTAATCAT	0.932721	174	+
>chr1:6090845-609104	11	TTAATCAT	0.932721	167	-
>chr1:4774948-477514	6	TTAATCAT	0.932721	139	-
>chr1:4833767-483396	7	TCAATCAA	0.918952	128	-
>chr1:5072821-507302	8	TGAATCAT	0.918887	84	-
>chr1:9956513-995671	48	TCAATCAC	0.909665	176	-
>chr1:9932599-993279	45	TCAATCAC	0.909665	127	+
>chr1:9574131-957433	42	TCATTCAT	0.90572	83	-
>chr1:7303541-730374	27	TCATTCAT	0.90572	107	-
>chr1:8797248-879744	35	TCAATTAT	0.905366	177	+
>chr1:7388025-738822	30	TCAATCAG	0.896366	4	+
>chr1:7444756-744495	33	TCAAACAT	0.886061	130	-
>chr1:6472202-647240	20	TCACTCAT	0.885652	20	-
>chr1:8797248-879744	35	TCTATCAT	0.863139	56	+
>chr1:6277750-627795	16	TCTATCAT	0.863139	95	+
>chr1:9574131-957433	42	TCCATCAT	0.862751	116	+
>chr1:6266967-626716	15	TCCATCAT	0.862751	112	-
>chr1:9574131-957433	42	TAAATCAA	0.853657	145	+
>chr1:8797248-879744	35	TAAATCAA	0.853657	7	-
>chr1:9932599-993279	45	TTAATCAA	0.851673	45	+
>chr1:6878570-687877	25	TTAATCAA	0.851673	90	+
>chr1:7386917-738711	29	TCAATCCT	0.844783	2	+
>chr1:9568576-956877	41	TAAATCAC	0.84437	22	-
>chr1:4833767-483396	7	TAAATCAC	0.84437	186	+
>chr1:8851545-885174	36	TAATTCAT	0.840425	84	+
>chr1:6437830-643803	19	TAATTCAT	0.840425	128	+
>chr1:9962925-996312	49	TAAATTAT	0.84007	189	-
>chr1:7768736-776893	34	TAAATTAT	0.84007	105	+
>chr1:7303541-730374	27	TTATTCAT	0.838441	169	+
>chr1:5072821-507302	8	TTATTCAT	0.838441	21	-
>chr1:4402453-440265	3	TGAATCAA	0.837839	130	-
>chr1:9932599-993279	45	TAAGTCAT	0.827328	12	+
>chr1:9574131-957433	42	TAAGTCAT	0.827328	55	-
>chr1:6721868-672206	23	TCATTCAA	0.824672	85	-
>chr1:6183701-618390	12	TGATTCAT	0.824607	71	-
>chr1:5072821-507302	8	TGATTCAT	0.824607	85	+
>chr1:3467418-346761	1	TCAATTAA	0.824318	186	-
>chr1:6437830-643803	19	TGAATTAT	0.824253	127	-
>chr1:6266967-626716	15	TGAATTAT	0.824253	16	+
>chr1:4024990-402519	2	TAAAACAT	0.820765	82	+
>chr1:9942670-994287	46	TTAAACAT	0.818782	80	+
>chr1:6360131-636033	17	TTAAACAT	0.818782	143	+
>chr1:5072821-507302	8	TTAAACAT	0.818782	148	-
>chr1:6588721-658892	21	TCAATAAC	0.800726	148	+
>chr1:6262414-626261	14	TCAGTTAT	0.797989	137	+
>chr1:6205539-620573	13	TCTATCAA	0.782091	96	-
>chr1:4662531-466273	5	TAAATCGT	0.779842	56	+
>chr1:4833767-483396	7	TTAATCGT	0.777858	61	+
**********

5)	TGTTTAAT	(ATTAAACA)	1.874

Matrix: MAT5	TGTTTAAT
A	0.1111	0.09112	0.1881	0.1074	0.1057	0.6769	0.7668	0.1993	
C	0.02537	0.03582	0.06521	0.08013	0.08927	0.09377	0.03432	0.08804	
G	0.07262	0.7214	0.06612	0.05896	0.07036	0.1072	0.116	0.09061	
T	0.7909	0.1516	0.6806	0.7536	0.7347	0.1221	0.08288	0.6221	

OCCURRENCES:
>chr1:6360131-636033	17	TGTTTAAT	1	142	-
>chr1:5072821-507302	8	TGTTTAAT	1	149	+
>chr1:9942670-994287	46	TGTTTAAA	0.919846	79	-
>chr1:6878570-687877	25	TGATTAAT	0.906643	89	-
>chr1:4774948-477514	6	TGATTAAT	0.906643	140	+
>chr1:9013525-901372	37	TGTTTAAG	0.899248	161	+
>chr1:6360131-636033	17	TGTTTAAG	0.899248	6	+
>chr1:5805347-580554	10	TGTTTAAC	0.898761	16	-
>chr1:9978791-997899	50	TGTTTGAT	0.892015	68	+
>chr1:6396504-639670	18	TGTTTGAT	0.892015	10	-
>chr1:4562216-456241	4	TGTTTGAT	0.892015	141	+
>chr1:6396504-639670	18	TTTTTAAT	0.891988	59	+
>chr1:6090845-609104	11	TTTTTAAT	0.891988	170	-
>chr1:9460371-946057	38	TGTTTCAT	0.889461	121	-
>chr1:9568576-956877	41	TGTTCAAT	0.877642	144	+
>chr1:7388801-738900	31	TGTTTAGT	0.876624	88	-
>chr1:6719561-671976	22	TGTCTAAT	0.872337	67	+
>chr1:6090845-609104	11	TGATTAAA	0.826489	168	+
>chr1:7444756-744495	33	TGTTTGAA	0.811861	131	+
>chr1:5072821-507302	8	TGTTTGAA	0.811861	156	-
>chr1:9932599-993279	45	TGTTTCAA	0.809307	123	+
>chr1:8797248-879744	35	TGTTTCAA	0.809307	173	+
>chr1:6396504-639670	18	TGTTTCAA	0.809307	179	-
>chr1:9932599-993279	45	TGATTAAC	0.805404	44	-
>chr1:9013525-901372	37	TGATTAAC	0.805404	173	-
>chr1:9574131-957433	42	TGATTTAT	0.801481	144	-
>chr1:9568576-956877	41	TGATTTAT	0.801481	23	+
>chr1:8797248-879744	35	TGATTTAT	0.801481	8	+
>chr1:8851545-885174	36	TGATTGAT	0.798658	119	-
>chr1:4833767-483396	7	TGATTGAT	0.798658	129	+
>chr1:9948240-994844	47	TGTATAAA	0.797343	126	+
>chr1:6205539-620573	13	TGTATAAA	0.797343	163	-
>chr1:9932599-993279	45	TGTTTAGA	0.79647	148	+
>chr1:4562216-456241	4	TGTTTAGA	0.79647	165	-
>chr1:6183701-618390	12	TGATTCAT	0.796104	71	-
>chr1:5072821-507302	8	TGATTCAT	0.796104	85	+
>chr1:9948240-994844	47	TGTTTATA	0.790191	128	-
>chr1:9978791-997899	50	TGATAAAT	0.787394	72	+
>chr1:6437830-643803	19	TGAATAAT	0.78414	124	+
>chr1:4024990-402519	2	TGATTATT	0.776988	186	+
>chr1:6183701-618390	12	TGTATAAC	0.776258	8	-
>chr1:6878570-687877	25	TGTTCTAT	0.77248	74	+
>chr1:3467418-346761	1	TGTATTAT	0.772335	25	-
>chr1:3467418-346761	1	TGTATTAT	0.772335	3	-
>chr1:7413722-741392	32	AGTTTAAC	0.769901	187	+
>chr1:9574131-957433	42	TGTATGAT	0.769512	119	-
>chr1:9568576-956877	41	TGTATAGT	0.754121	107	+
>chr1:7444756-744495	33	AGTATAAT	0.748637	69	+
>chr1:6090845-609104	11	AGTATAAT	0.748637	93	-
>chr1:6721868-672206	23	GGTATAAT	0.741335	124	-
**********

6)	ATTACT	(AGTAAT)	1.823

Matrix: MAT6	ATTACT
A	0.8781	0.0835	0.07038	0.7901	0.03473	0.1075	
C	0.04152	0.05455	0.05837	0.03709	0.7755	0.04605	
G	0.0322	0.01277	0.1088	0.07223	0.04238	0.01572	
T	0.04814	0.8492	0.7624	0.1005	0.1473	0.8308	

OCCURRENCES:
>chr1:9978791-997899	50	ATTACT	1	31	+
>chr1:9568576-956877	41	ATTACT	1	154	-
>chr1:9013525-901372	37	ATTACT	1	183	-
>chr1:7209035-720923	26	ATTACT	1	183	+
>chr1:6878570-687877	25	ATTACT	1	64	-
>chr1:6719561-671976	22	ATTACT	1	137	+
>chr1:6588721-658892	21	ATTACT	1	9	-
>chr1:6472202-647240	20	ATTACT	1	176	-
>chr1:6472202-647240	20	ATTACT	1	29	-
>chr1:6360131-636033	17	ATTACT	1	86	+
>chr1:6262414-626261	14	ATTACT	1	160	+
>chr1:6090845-609104	11	ATTACT	1	20	-
>chr1:5805347-580554	10	ATTACT	1	176	-
>chr1:5072821-507302	8	ATTACT	1	46	+
>chr1:4774948-477514	6	ATTACT	1	194	-
>chr1:3467418-346761	1	ATTACT	1	32	+
>chr1:9962925-996312	49	ATTATT	0.866209	188	-
>chr1:9962925-996312	49	ATTATT	0.866209	133	+
>chr1:9942670-994287	46	ATTATT	0.866209	73	+
>chr1:8797248-879744	35	ATTATT	0.866209	192	+
>chr1:6878570-687877	25	ATTATT	0.866209	41	-
>chr1:6719561-671976	22	ATTATT	0.866209	181	-
>chr1:6719561-671976	22	ATTATT	0.866209	145	-
>chr1:6472202-647240	20	ATTATT	0.866209	5	+
>chr1:6437830-643803	19	ATTATT	0.866209	126	-
>chr1:6396504-639670	18	ATTATT	0.866209	55	+
>chr1:6090845-609104	11	ATTATT	0.866209	84	+
>chr1:6090845-609104	11	ATTATT	0.866209	43	+
>chr1:5805347-580554	10	ATTATT	0.866209	65	-
>chr1:4024990-402519	2	ATTATT	0.866209	188	+
>chr1:3467418-346761	1	ATTATT	0.866209	24	-
>chr1:9942670-994287	46	ATGACT	0.860789	34	+
>chr1:9932599-993279	45	ATGACT	0.860789	14	-
>chr1:9574131-957433	42	ATGACT	0.860789	55	+
>chr1:9013525-901372	37	ATGACT	0.860789	193	+
>chr1:7768736-776893	34	ATGACT	0.860789	121	-
>chr1:7444756-744495	33	ATGACT	0.860789	194	-
>chr1:7444756-744495	33	ATGACT	0.860789	40	-
>chr1:7303541-730374	27	ATGACT	0.860789	111	+
>chr1:6472202-647240	20	ATGACT	0.860789	143	-
>chr1:6183701-618390	12	ATGACT	0.860789	175	-
>chr1:4662531-466273	5	ATGACT	0.860789	126	+
>chr1:6878570-687877	25	ATTACA	0.845949	38	-
>chr1:6719561-671976	22	ATTACA	0.845949	127	+
>chr1:6588721-658892	21	ATTACA	0.845949	140	-
>chr1:6090845-609104	11	ATTACA	0.845949	89	-
>chr1:5805347-580554	10	ATTACA	0.845949	147	+
>chr1:5805347-580554	10	ATTACA	0.845949	125	+
>chr1:4833767-483396	7	ATTACA	0.845949	107	-
>chr1:4774948-477514	6	ATTACA	0.845949	9	-
**********

7)	TCACAT	(ATGTGA)	1.8

Matrix: MAT7	TCACAT
A	0.08233	0.1013	0.9032	0.139	0.8283	0.0876	
C	0.04274	0.7009	0.02867	0.7396	0.0355	0.04803	
G	0.04677	0.1109	0.01307	0.0554	0.0163	0.05845	
T	0.8282	0.08693	0.05509	0.06599	0.1199	0.8059	

OCCURRENCES:
>chr1:9956513-995671	48	TCACAT	1	18	+
>chr1:9813405-981360	44	TCACAT	1	66	-
>chr1:9568576-956877	41	TCACAT	1	33	+
>chr1:8797248-879744	35	TCACAT	1	32	+
>chr1:7303541-730374	27	TCACAT	1	80	+
>chr1:7209035-720923	26	TCACAT	1	127	-
>chr1:6878570-687877	25	TCACAT	1	101	+
>chr1:6878570-687877	25	TCACAT	1	51	-
>chr1:6588721-658892	21	TCACAT	1	22	-
>chr1:6472202-647240	20	TCACAT	1	74	-
>chr1:6277750-627795	16	TCACAT	1	31	+
>chr1:6266967-626716	15	TCACAT	1	171	+
>chr1:6205539-620573	13	TCACAT	1	33	-
>chr1:5805347-580554	10	TCACAT	1	131	-
>chr1:4774948-477514	6	TCACAT	1	132	-
>chr1:4774948-477514	6	TCACAT	1	19	+
>chr1:4662531-466273	5	TCACAT	1	31	-
>chr1:4402453-440265	3	TCACAT	1	135	+
>chr1:4024990-402519	2	TCACAT	1	66	-
>chr1:3467418-346761	1	TCACAT	1	79	+
>chr1:3467418-346761	1	TCACAT	1	53	+
>chr1:9978791-997899	50	TGACAT	0.870153	84	-
>chr1:9942670-994287	46	TGACAT	0.870153	93	+
>chr1:9574131-957433	42	TGACAT	0.870153	111	+
>chr1:9554705-955490	40	TGACAT	0.870153	53	-
>chr1:7303541-730374	27	TGACAT	0.870153	99	+
>chr1:7209035-720923	26	TGACAT	0.870153	121	-
>chr1:6878570-687877	25	TGACAT	0.870153	69	+
>chr1:6437830-643803	19	TGACAT	0.870153	6	-
>chr1:6183701-618390	12	TGACAT	0.870153	140	+
>chr1:4833767-483396	7	TGACAT	0.870153	29	-
>chr1:9956513-995671	48	TAACAT	0.868041	137	+
>chr1:9574131-957433	42	TAACAT	0.868041	104	-
>chr1:9554705-955490	40	TAACAT	0.868041	47	-
>chr1:8851545-885174	36	TAACAT	0.868041	100	-
>chr1:8797248-879744	35	TAACAT	0.868041	103	+
>chr1:7768736-776893	34	TAACAT	0.868041	80	-
>chr1:6090845-609104	11	TAACAT	0.868041	154	+
>chr1:9962925-996312	49	TCAAAT	0.867804	40	-
>chr1:9932599-993279	45	TCAAAT	0.867804	176	+
>chr1:9813405-981360	44	TCAAAT	0.867804	55	+
>chr1:8851545-885174	36	TCAAAT	0.867804	188	-
>chr1:8851545-885174	36	TCAAAT	0.867804	184	+
>chr1:8851545-885174	36	TCAAAT	0.867804	96	+
>chr1:6719561-671976	22	TCAAAT	0.867804	142	+
>chr1:5805347-580554	10	TCAAAT	0.867804	180	-
>chr1:5805347-580554	10	TCAAAT	0.867804	121	+
>chr1:4833767-483396	7	TCAAAT	0.867804	126	-
>chr1:4833767-483396	7	TCAAAT	0.867804	25	+
>chr1:4774948-477514	6	TTACAT	0.864876	8	-
**********

8)	TACATT	(AATGTA)	1.773

Matrix: MAT8	TACATT
A	0.09867	0.7322	0.1194	0.8806	0.101	0.09423	
C	0.1068	0.06715	0.743	0.03825	0.03645	0.02894	
G	0.1046	0.07625	0.0467	0.01049	0.07555	0.07099	
T	0.6899	0.1244	0.09086	0.07061	0.7871	0.8058	

OCCURRENCES:
>chr1:9962925-996312	49	TACATT	1	130	+
>chr1:9942670-994287	46	TACATT	1	158	+
>chr1:9932599-993279	45	TACATT	1	105	-
>chr1:9460371-946057	38	TACATT	1	173	+
>chr1:9013525-901372	37	TACATT	1	59	+
>chr1:6721868-672206	23	TACATT	1	46	+
>chr1:6588721-658892	21	TACATT	1	160	-
>chr1:6472202-647240	20	TACATT	1	92	-
>chr1:6396504-639670	18	TACATT	1	64	-
>chr1:6205539-620573	13	TACATT	1	167	+
>chr1:4024990-402519	2	TACATT	1	121	-
>chr1:3467418-346761	1	TACATT	1	29	+
>chr1:4662531-466273	5	CACATT	0.865945	30	-
>chr1:4024990-402519	2	CACATT	0.865945	65	-
>chr1:3467418-346761	1	CACATT	0.865945	54	+
>chr1:9942670-994287	46	GACATT	0.865452	94	+
>chr1:9554705-955490	40	GACATT	0.865452	52	-
>chr1:7388801-738900	31	GACATT	0.865452	176	-
>chr1:7303541-730374	27	GACATT	0.865452	100	+
>chr1:6437830-643803	19	GACATT	0.865452	84	-
>chr1:6437830-643803	19	GACATT	0.865452	5	-
>chr1:6205539-620573	13	GACATT	0.865452	114	+
>chr1:6183701-618390	12	GACATT	0.865452	83	+
>chr1:4833767-483396	7	GACATT	0.865452	28	-
>chr1:4562216-456241	4	GACATT	0.865452	157	+
>chr1:9978791-997899	50	TAAATT	0.856652	28	+
>chr1:9962925-996312	49	TAAATT	0.856652	191	-
>chr1:9948240-994844	47	TAAATT	0.856652	17	-
>chr1:9942670-994287	46	TAAATT	0.856652	131	-
>chr1:9813405-981360	44	TAAATT	0.856652	144	+
>chr1:7768736-776893	34	TAAATT	0.856652	105	+
>chr1:6205539-620573	13	TAAATT	0.856652	161	-
>chr1:6090845-609104	11	TAAATT	0.856652	123	-
>chr1:4774948-477514	6	TAAATT	0.856652	73	+
>chr1:9956513-995671	48	TATATT	0.85009	155	+
>chr1:9942670-994287	46	TATATT	0.85009	119	+
>chr1:9813405-981360	44	TATATT	0.85009	31	-
>chr1:9013525-901372	37	TATATT	0.85009	78	-
>chr1:7768736-776893	34	TATATT	0.85009	2	-
>chr1:7413722-741392	32	TATATT	0.85009	87	+
>chr1:7413722-741392	32	TATATT	0.85009	85	-
>chr1:6472202-647240	20	TATATT	0.85009	2	+
>chr1:6360131-636033	17	TATATT	0.85009	26	-
>chr1:9813405-981360	44	TACAAT	0.842287	28	+
>chr1:9535189-953538	39	TACAAT	0.842287	43	+
>chr1:7386917-738711	29	TACAAT	0.842287	47	+
>chr1:6878570-687877	25	TACAAT	0.842287	36	-
>chr1:6090845-609104	11	TACAAT	0.842287	87	-
>chr1:5805347-580554	10	TACAAT	0.842287	127	+
>chr1:4774948-477514	6	TACAAT	0.842287	120	-
**********

9)	TTGACA	(TGTCAA)	1.733

Matrix: MAT9	TTGACA
A	0.1287	0.06713	0.09732	0.8048	0.1278	0.8784	
C	0.07599	0.01615	0.136	0.02754	0.7339	0.02517	
G	0.07764	0.03641	0.6902	0.03821	0.05137	0.01588	
T	0.7176	0.8803	0.0764	0.1295	0.08697	0.0806	

OCCURRENCES:
>chr1:9942670-994287	46	TTGACA	1	92	+
>chr1:8851545-885174	36	TTGACA	1	190	+
>chr1:8797248-879744	35	TTGACA	1	125	-
>chr1:7768736-776893	34	TTGACA	1	75	-
>chr1:7444756-744495	33	TTGACA	1	9	-
>chr1:7209035-720923	26	TTGACA	1	122	-
>chr1:6437830-643803	19	TTGACA	1	7	-
>chr1:6205539-620573	13	TTGACA	1	136	+
>chr1:6090845-609104	11	TTGACA	1	181	+
>chr1:5805347-580554	10	TTGACA	1	119	-
>chr1:4833767-483396	7	TTGACA	1	30	-
>chr1:4024990-402519	2	TTGACA	1	21	+
>chr1:6719561-671976	22	TTCACA	0.875237	86	-
>chr1:6437830-643803	19	TTCACA	0.875237	122	-
>chr1:6277750-627795	16	TTCACA	0.875237	30	+
>chr1:6266967-626716	15	TTCACA	0.875237	170	+
>chr1:6262414-626261	14	TTCACA	0.875237	59	+
>chr1:6090845-609104	11	TTCACA	0.875237	30	+
>chr1:5805347-580554	10	TTCACA	0.875237	132	-
>chr1:5805347-580554	10	TTCACA	0.875237	43	+
>chr1:5168670-516887	9	TTCACA	0.875237	155	+
>chr1:5168670-516887	9	TTCACA	0.875237	24	-
>chr1:4774948-477514	6	TTCACA	0.875237	133	-
>chr1:4402453-440265	3	TTCACA	0.875237	134	+
>chr1:9978791-997899	50	ATGACA	0.867422	85	-
>chr1:9956513-995671	48	ATGACA	0.867422	106	+
>chr1:9932599-993279	45	ATGACA	0.867422	140	+
>chr1:9574131-957433	42	ATGACA	0.867422	179	-
>chr1:9574131-957433	42	ATGACA	0.867422	110	+
>chr1:7768736-776893	34	ATGACA	0.867422	139	+
>chr1:6878570-687877	25	ATGACA	0.867422	68	+
>chr1:6360131-636033	17	ATGACA	0.867422	149	+
>chr1:6262414-626261	14	ATGACA	0.867422	102	-
>chr1:6183701-618390	12	ATGACA	0.867422	108	-
>chr1:6183701-618390	12	ATGACA	0.867422	42	+
>chr1:6090845-609104	11	ATGACA	0.867422	146	-
>chr1:9962925-996312	49	TTAACA	0.866518	121	+
>chr1:9932599-993279	45	TTAACA	0.866518	43	-
>chr1:9574131-957433	42	TTAACA	0.866518	105	-
>chr1:9554705-955490	40	TTAACA	0.866518	48	-
>chr1:8851545-885174	36	TTAACA	0.866518	101	-
>chr1:6266967-626716	15	TTAACA	0.866518	42	-
>chr1:6090845-609104	11	TTAACA	0.866518	153	+
>chr1:4024990-402519	2	TTAACA	0.866518	79	-
>chr1:9978791-997899	50	TTGATA	0.854356	71	+
>chr1:9568576-956877	41	TTGATA	0.854356	190	-
>chr1:9460371-946057	38	TTGATA	0.854356	85	-
>chr1:6588721-658892	21	TTGATA	0.854356	146	-
>chr1:6205539-620573	13	TTGATA	0.854356	96	+
>chr1:4833767-483396	7	TTGATA	0.854356	23	-
**********

10)	AATAAT	(ATTATT)	1.714

Matrix: MAT10	AATAAT
A	0.821	0.7797	0.1145	0.7009	0.8508	0.1043	
C	0.05975	0.04103	0.05818	0.09164	0.07329	0.07718	
G	0.05042	0.1458	0.06827	0.08449	0.04593	0.05097	
T	0.06887	0.03344	0.759	0.1229	0.02993	0.7675	

OCCURRENCES:
>chr1:9962925-996312	49	AATAAT	1	188	+
>chr1:9962925-996312	49	AATAAT	1	133	-
>chr1:9942670-994287	46	AATAAT	1	73	-
>chr1:8797248-879744	35	AATAAT	1	192	-
>chr1:6878570-687877	25	AATAAT	1	41	+
>chr1:6719561-671976	22	AATAAT	1	181	+
>chr1:6719561-671976	22	AATAAT	1	145	+
>chr1:6472202-647240	20	AATAAT	1	5	-
>chr1:6437830-643803	19	AATAAT	1	126	+
>chr1:6396504-639670	18	AATAAT	1	55	-
>chr1:6090845-609104	11	AATAAT	1	84	-
>chr1:6090845-609104	11	AATAAT	1	43	-
>chr1:5805347-580554	10	AATAAT	1	65	+
>chr1:4024990-402519	2	AATAAT	1	188	-
>chr1:3467418-346761	1	AATAAT	1	24	+
>chr1:9962925-996312	49	AATTAT	0.867789	189	-
>chr1:8797248-879744	35	AATTAT	0.867789	179	+
>chr1:7768736-776893	34	AATTAT	0.867789	107	+
>chr1:6719561-671976	22	AATTAT	0.867789	182	-
>chr1:6719561-671976	22	AATTAT	0.867789	146	-
>chr1:6588721-658892	21	AATTAT	0.867789	143	+
>chr1:6437830-643803	19	AATTAT	0.867789	127	-
>chr1:6396504-639670	18	AATTAT	0.867789	54	+
>chr1:6266967-626716	15	AATTAT	0.867789	18	+
>chr1:6090845-609104	11	AATTAT	0.867789	92	+
>chr1:6090845-609104	11	AATTAT	0.867789	83	+
>chr1:5805347-580554	10	AATTAT	0.867789	66	-
>chr1:8851545-885174	36	AATCAT	0.860628	122	+
>chr1:8797248-879744	35	AATCAT	0.860628	138	-
>chr1:7444756-744495	33	AATCAT	0.860628	13	+
>chr1:6090845-609104	11	AATCAT	0.860628	167	-
>chr1:5168670-516887	9	AATCAT	0.860628	31	-
>chr1:5072821-507302	8	AATCAT	0.860628	84	-
>chr1:4774948-477514	6	AATCAT	0.860628	139	-
>chr1:9978791-997899	50	AGTAAT	0.854996	31	-
>chr1:9568576-956877	41	AGTAAT	0.854996	154	+
>chr1:9013525-901372	37	AGTAAT	0.854996	183	+
>chr1:7209035-720923	26	AGTAAT	0.854996	183	-
>chr1:6878570-687877	25	AGTAAT	0.854996	64	+
>chr1:6719561-671976	22	AGTAAT	0.854996	137	-
>chr1:6588721-658892	21	AGTAAT	0.854996	9	+
>chr1:6472202-647240	20	AGTAAT	0.854996	176	+
>chr1:6472202-647240	20	AGTAAT	0.854996	29	+
>chr1:6360131-636033	17	AGTAAT	0.854996	86	-
>chr1:6262414-626261	14	AGTAAT	0.854996	160	-
>chr1:6090845-609104	11	AGTAAT	0.854996	20	+
>chr1:5805347-580554	10	AGTAAT	0.854996	176	+
>chr1:5072821-507302	8	AGTAAT	0.854996	46	-
>chr1:4774948-477514	6	AGTAAT	0.854996	194	+
>chr1:3467418-346761	1	AGTAAT	0.854996	32	-
**********

11)	ATGACT	(AGTCAT)	1.702

Matrix: MAT11	ATGACT
A	0.7923	0.07691	0.08105	0.8363	0.111	0.123	
C	0.07045	0.02479	0.07396	0.02863	0.7081	0.04261	
G	0.06487	0.02256	0.6694	0.03558	0.06369	0.01484	
T	0.07241	0.8757	0.1756	0.0995	0.1172	0.8196	

OCCURRENCES:
>chr1:9942670-994287	46	ATGACT	1	34	+
>chr1:9932599-993279	45	ATGACT	1	14	-
>chr1:9574131-957433	42	ATGACT	1	55	+
>chr1:9013525-901372	37	ATGACT	1	193	+
>chr1:7768736-776893	34	ATGACT	1	121	-
>chr1:7444756-744495	33	ATGACT	1	194	-
>chr1:7444756-744495	33	ATGACT	1	40	-
>chr1:7303541-730374	27	ATGACT	1	111	+
>chr1:6472202-647240	20	ATGACT	1	143	-
>chr1:6183701-618390	12	ATGACT	1	175	-
>chr1:4662531-466273	5	ATGACT	1	126	+
>chr1:9978791-997899	50	ATTACT	0.888601	31	+
>chr1:9568576-956877	41	ATTACT	0.888601	154	-
>chr1:9013525-901372	37	ATTACT	0.888601	183	-
>chr1:7209035-720923	26	ATTACT	0.888601	183	+
>chr1:6878570-687877	25	ATTACT	0.888601	64	-
>chr1:6719561-671976	22	ATTACT	0.888601	137	+
>chr1:6588721-658892	21	ATTACT	0.888601	9	-
>chr1:6472202-647240	20	ATTACT	0.888601	176	-
>chr1:6472202-647240	20	ATTACT	0.888601	29	-
>chr1:6360131-636033	17	ATTACT	0.888601	86	+
>chr1:6262414-626261	14	ATTACT	0.888601	160	+
>chr1:6090845-609104	11	ATTACT	0.888601	20	-
>chr1:5805347-580554	10	ATTACT	0.888601	176	-
>chr1:5072821-507302	8	ATTACT	0.888601	46	+
>chr1:4774948-477514	6	ATTACT	0.888601	194	-
>chr1:3467418-346761	1	ATTACT	0.888601	32	+
>chr1:8797248-879744	35	ATAACT	0.867272	132	+
>chr1:7209035-720923	26	ATAACT	0.867272	79	+
>chr1:6360131-636033	17	ATAACT	0.867272	111	-
>chr1:6262414-626261	14	ATAACT	0.867272	139	-
>chr1:6183701-618390	12	ATAACT	0.867272	7	-
>chr1:5072821-507302	8	ATAACT	0.867272	25	+
>chr1:9956513-995671	48	ATGATT	0.866692	35	-
>chr1:9013525-901372	37	ATGATT	0.866692	176	-
>chr1:8851545-885174	36	ATGATT	0.866692	122	-
>chr1:8797248-879744	35	ATGATT	0.866692	138	+
>chr1:7444756-744495	33	ATGATT	0.866692	13	-
>chr1:6090845-609104	11	ATGATT	0.866692	167	+
>chr1:5168670-516887	9	ATGATT	0.866692	31	+
>chr1:5072821-507302	8	ATGATT	0.866692	84	+
>chr1:4774948-477514	6	ATGATT	0.866692	139	+
>chr1:8851545-885174	36	ATGAAT	0.865302	86	-
>chr1:7303541-730374	27	ATGAAT	0.865302	171	-
>chr1:7303541-730374	27	ATGAAT	0.865302	107	+
>chr1:6437830-643803	19	ATGAAT	0.865302	130	-
>chr1:6183701-618390	12	ATGAAT	0.865302	71	+
>chr1:5072821-507302	8	ATGAAT	0.865302	127	+
>chr1:5072821-507302	8	ATGAAT	0.865302	87	-
>chr1:5072821-507302	8	ATGAAT	0.865302	21	+
**********

12)	TTGAAA	(TTTCAA)	1.693

Matrix: MAT12	TTGAAA
A	0.08972	0.0524	0.2142	0.8734	0.7765	0.8008	
C	0.08565	0.01703	0.08046	0.009563	0.09992	0.05955	
G	0.07526	0.08263	0.6446	0.04169	0.04608	0.03337	
T	0.7494	0.8479	0.06075	0.07533	0.07746	0.1063	

OCCURRENCES:
>chr1:9956513-995671	48	TTGAAA	1	180	+
>chr1:9948240-994844	47	TTGAAA	1	112	+
>chr1:9932599-993279	45	TTGAAA	1	125	-
>chr1:8797248-879744	35	TTGAAA	1	175	-
>chr1:7444756-744495	33	TTGAAA	1	161	-
>chr1:7388025-738822	30	TTGAAA	1	2	-
>chr1:7309743-730994	28	TTGAAA	1	146	-
>chr1:7209035-720923	26	TTGAAA	1	54	-
>chr1:6750817-675101	24	TTGAAA	1	153	+
>chr1:6588721-658892	21	TTGAAA	1	101	+
>chr1:6396504-639670	18	TTGAAA	1	179	+
>chr1:6266967-626716	15	TTGAAA	1	176	-
>chr1:6090845-609104	11	TTGAAA	1	102	+
>chr1:4562216-456241	4	TTGAAA	1	148	-
>chr1:3467418-346761	1	TTGAAA	1	190	+
>chr1:6205539-620573	13	TTAAAA	0.903286	157	+
>chr1:6205539-620573	13	TTAAAA	0.903286	28	+
>chr1:6090845-609104	11	TTAAAA	0.903286	171	+
>chr1:6090845-609104	11	TTAAAA	0.903286	151	-
>chr1:5072821-507302	8	TTAAAA	0.903286	114	+
>chr1:4024990-402519	2	TTAAAA	0.903286	81	+
>chr1:3467418-346761	1	TTAAAA	0.903286	184	-
>chr1:9942670-994287	46	TTGACA	0.847972	92	+
>chr1:8851545-885174	36	TTGACA	0.847972	190	+
>chr1:8797248-879744	35	TTGACA	0.847972	125	-
>chr1:7768736-776893	34	TTGACA	0.847972	75	-
>chr1:7444756-744495	33	TTGACA	0.847972	9	-
>chr1:7209035-720923	26	TTGACA	0.847972	122	-
>chr1:6437830-643803	19	TTGACA	0.847972	7	-
>chr1:6205539-620573	13	TTGACA	0.847972	136	+
>chr1:6090845-609104	11	TTGACA	0.847972	181	+
>chr1:5805347-580554	10	TTGACA	0.847972	119	-
>chr1:4833767-483396	7	TTGACA	0.847972	30	-
>chr1:4024990-402519	2	TTGACA	0.847972	21	+
>chr1:9942670-994287	46	TTGAAT	0.843956	162	+
>chr1:7444756-744495	33	TTGAAT	0.843956	134	+
>chr1:7413722-741392	32	TTGAAT	0.843956	123	-
>chr1:6721868-672206	23	TTGAAT	0.843956	85	+
>chr1:6277750-627795	16	TTGAAT	0.843956	35	-
>chr1:6277750-627795	16	TTGAAT	0.843956	25	+
>chr1:6183701-618390	12	TTGAAT	0.843956	87	+
>chr1:6090845-609104	11	TTGAAT	0.843956	119	-
>chr1:6090845-609104	11	TTGAAT	0.843956	115	+
>chr1:5072821-507302	8	TTGAAT	0.843956	155	-
>chr1:9978791-997899	50	TTGATA	0.842925	71	+
>chr1:9568576-956877	41	TTGATA	0.842925	190	-
>chr1:9460371-946057	38	TTGATA	0.842925	85	-
>chr1:6588721-658892	21	TTGATA	0.842925	146	-
>chr1:6205539-620573	13	TTGATA	0.842925	96	+
>chr1:4833767-483396	7	TTGATA	0.842925	23	-
**********

13)	ATTTTA	(TAAAAT)	1.691

Matrix: MAT13	ATTTTA
A	0.7686	0.09324	0.05315	0.07052	0.1079	0.7442	
C	0.05296	0.05566	0.02564	0.04286	0.09559	0.0825	
G	0.06642	0.0539	0.07598	0.07754	0.08916	0.06427	
T	0.112	0.7972	0.8452	0.8091	0.7073	0.1091	

OCCURRENCES:
>chr1:9956513-995671	48	ATTTTA	1	185	+
>chr1:9942670-994287	46	ATTTTA	1	135	-
>chr1:9813405-981360	44	ATTTTA	1	132	-
>chr1:9013525-901372	37	ATTTTA	1	135	-
>chr1:9013525-901372	37	ATTTTA	1	113	-
>chr1:8851545-885174	36	ATTTTA	1	104	-
>chr1:8797248-879744	35	ATTTTA	1	147	-
>chr1:7768736-776893	34	ATTTTA	1	135	-
>chr1:7413722-741392	32	ATTTTA	1	11	+
>chr1:7388801-738900	31	ATTTTA	1	63	+
>chr1:7386917-738711	29	ATTTTA	1	31	-
>chr1:6472202-647240	20	ATTTTA	1	33	+
>chr1:6266967-626716	15	ATTTTA	1	3	-
>chr1:6262414-626261	14	ATTTTA	1	184	+
>chr1:6205539-620573	13	ATTTTA	1	158	-
>chr1:6205539-620573	13	ATTTTA	1	29	-
>chr1:6090845-609104	11	ATTTTA	1	150	+
>chr1:5805347-580554	10	ATTTTA	1	155	+
>chr1:5072821-507302	8	ATTTTA	1	115	-
>chr1:4833767-483396	7	ATTTTA	1	122	-
>chr1:4024990-402519	2	ATTTTA	1	118	-
>chr1:3467418-346761	1	ATTTTA	1	183	+
>chr1:3467418-346761	1	ATTTTA	1	134	+
>chr1:8851545-885174	36	ATTTGA	0.857659	188	+
>chr1:8851545-885174	36	ATTTGA	0.857659	184	-
>chr1:8851545-885174	36	ATTTGA	0.857659	96	-
>chr1:6719561-671976	22	ATTTGA	0.857659	142	-
>chr1:5805347-580554	10	ATTTGA	0.857659	180	+
>chr1:5805347-580554	10	ATTTGA	0.857659	121	-
>chr1:4833767-483396	7	ATTTGA	0.857659	126	+
>chr1:4833767-483396	7	ATTTGA	0.857659	25	-
>chr1:9813405-981360	44	ATTGTA	0.83155	28	-
>chr1:9535189-953538	39	ATTGTA	0.83155	43	-
>chr1:7386917-738711	29	ATTGTA	0.83155	47	-
>chr1:6878570-687877	25	ATTGTA	0.83155	36	+
>chr1:6090845-609104	11	ATTGTA	0.83155	87	+
>chr1:5805347-580554	10	ATTGTA	0.83155	127	-
>chr1:4774948-477514	6	ATTGTA	0.83155	120	+
>chr1:9948240-994844	47	ATTATA	0.829934	57	-
>chr1:7444756-744495	33	ATTATA	0.829934	71	-
>chr1:6721868-672206	23	ATTATA	0.829934	124	+
>chr1:6266967-626716	15	ATTATA	0.829934	19	+
>chr1:6090845-609104	11	ATTATA	0.829934	93	+
>chr1:9956513-995671	48	ATGTTA	0.822869	137	-
>chr1:9574131-957433	42	ATGTTA	0.822869	104	+
>chr1:9554705-955490	40	ATGTTA	0.822869	47	+
>chr1:8851545-885174	36	ATGTTA	0.822869	100	+
>chr1:8797248-879744	35	ATGTTA	0.822869	103	-
>chr1:7768736-776893	34	ATGTTA	0.822869	80	+
>chr1:6090845-609104	11	ATGTTA	0.822869	154	-
**********

14)	TAAACA	(TGTTTA)	1.685

Matrix: MAT14	TAAACA
A	0.1209	0.7643	0.8407	0.816	0.1373	0.8505	
C	0.06995	0.06399	0.03895	0.04513	0.685	0.05353	
G	0.09693	0.07741	0.05489	0.04938	0.08995	0.02176	
T	0.7122	0.09432	0.06543	0.08946	0.08774	0.07422	

OCCURRENCES:
>chr1:9948240-994844	47	TAAACA	1	130	+
>chr1:9942670-994287	46	TAAACA	1	81	+
>chr1:9932599-993279	45	TAAACA	1	148	-
>chr1:9574131-957433	42	TAAACA	1	5	+
>chr1:9013525-901372	37	TAAACA	1	161	-
>chr1:7768736-776893	34	TAAACA	1	169	+
>chr1:7388801-738900	31	TAAACA	1	90	+
>chr1:6472202-647240	20	TAAACA	1	12	-
>chr1:6360131-636033	17	TAAACA	1	144	+
>chr1:6360131-636033	17	TAAACA	1	6	-
>chr1:5805347-580554	10	TAAACA	1	18	+
>chr1:5072821-507302	8	TAAACA	1	149	-
>chr1:5072821-507302	8	TAAACA	1	15	+
>chr1:4562216-456241	4	TAAACA	1	167	+
>chr1:7209035-720923	26	TAAAGA	0.862934	168	+
>chr1:6721868-672206	23	TAAAGA	0.862934	96	-
>chr1:6588721-658892	21	TAAAGA	0.862934	84	-
>chr1:6437830-643803	19	TAAAGA	0.862934	173	-
>chr1:6396504-639670	18	TAAAGA	0.862934	5	+
>chr1:6205539-620573	13	TAAAGA	0.862934	190	+
>chr1:6205539-620573	13	TAAAGA	0.862934	25	-
>chr1:4024990-402519	2	TAAAGA	0.862934	36	+
>chr1:9962925-996312	49	TTAACA	0.845673	121	+
>chr1:9932599-993279	45	TTAACA	0.845673	43	-
>chr1:9574131-957433	42	TTAACA	0.845673	105	-
>chr1:9554705-955490	40	TTAACA	0.845673	48	-
>chr1:8851545-885174	36	TTAACA	0.845673	101	-
>chr1:6266967-626716	15	TTAACA	0.845673	42	-
>chr1:6090845-609104	11	TTAACA	0.845673	153	+
>chr1:4024990-402519	2	TTAACA	0.845673	79	-
>chr1:9956513-995671	48	TCAACA	0.838688	85	+
>chr1:9568576-956877	41	TCAACA	0.838688	88	-
>chr1:8797248-879744	35	TCAACA	0.838688	127	+
>chr1:6878570-687877	25	TCAACA	0.838688	2	-
>chr1:6262414-626261	14	TCAACA	0.838688	130	-
>chr1:6205539-620573	13	TCAACA	0.838688	134	-
>chr1:6183701-618390	12	TCAACA	0.838688	54	-
>chr1:9932599-993279	45	TAATCA	0.832635	46	+
>chr1:9013525-901372	37	TAATCA	0.832635	175	+
>chr1:6878570-687877	25	TAATCA	0.832635	91	+
>chr1:6090845-609104	11	TAATCA	0.832635	168	-
>chr1:4774948-477514	6	TAATCA	0.832635	140	-
>chr1:4024990-402519	2	TAATCA	0.832635	186	-
>chr1:3467418-346761	1	TAATCA	0.832635	50	+
>chr1:9956513-995671	48	TATACA	0.821406	153	-
>chr1:9948240-994844	47	TATACA	0.821406	126	-
>chr1:9568576-956877	41	TATACA	0.821406	107	-
>chr1:6437830-643803	19	TATACA	0.821406	105	+
>chr1:6205539-620573	13	TATACA	0.821406	165	+
>chr1:6183701-618390	12	TATACA	0.821406	10	+
**********

15)	ATGATT	(AATCAT)	1.678

Matrix: MAT15	ATGATT
A	0.7798	0.03895	0.1394	0.8016	0.09996	0.05479	
C	0.04628	0.04674	0.09287	0.04385	0.1069	0.06237	
G	0.07995	0.03341	0.6306	0.0422	0.05873	0.09202	
T	0.09401	0.8809	0.1371	0.1123	0.7344	0.7908	

OCCURRENCES:
>chr1:9956513-995671	48	ATGATT	1	35	-
>chr1:9013525-901372	37	ATGATT	1	176	-
>chr1:8851545-885174	36	ATGATT	1	122	-
>chr1:8797248-879744	35	ATGATT	1	138	+
>chr1:7444756-744495	33	ATGATT	1	13	-
>chr1:6090845-609104	11	ATGATT	1	167	+
>chr1:5168670-516887	9	ATGATT	1	31	+
>chr1:5072821-507302	8	ATGATT	1	84	+
>chr1:4774948-477514	6	ATGATT	1	139	+
>chr1:9962925-996312	49	ATAATT	0.885497	189	+
>chr1:8797248-879744	35	ATAATT	0.885497	179	-
>chr1:7768736-776893	34	ATAATT	0.885497	107	-
>chr1:6719561-671976	22	ATAATT	0.885497	182	+
>chr1:6719561-671976	22	ATAATT	0.885497	146	+
>chr1:6588721-658892	21	ATAATT	0.885497	143	-
>chr1:6437830-643803	19	ATAATT	0.885497	127	+
>chr1:6396504-639670	18	ATAATT	0.885497	54	-
>chr1:6266967-626716	15	ATAATT	0.885497	18	-
>chr1:6090845-609104	11	ATAATT	0.885497	92	-
>chr1:6090845-609104	11	ATAATT	0.885497	83	-
>chr1:5805347-580554	10	ATAATT	0.885497	66	+
>chr1:9962925-996312	49	ATTATT	0.884969	188	-
>chr1:9962925-996312	49	ATTATT	0.884969	133	+
>chr1:9942670-994287	46	ATTATT	0.884969	73	+
>chr1:8797248-879744	35	ATTATT	0.884969	192	+
>chr1:6878570-687877	25	ATTATT	0.884969	41	-
>chr1:6719561-671976	22	ATTATT	0.884969	181	-
>chr1:6719561-671976	22	ATTATT	0.884969	145	-
>chr1:6472202-647240	20	ATTATT	0.884969	5	+
>chr1:6437830-643803	19	ATTATT	0.884969	126	-
>chr1:6396504-639670	18	ATTATT	0.884969	55	+
>chr1:6090845-609104	11	ATTATT	0.884969	84	+
>chr1:6090845-609104	11	ATTATT	0.884969	43	+
>chr1:5805347-580554	10	ATTATT	0.884969	65	-
>chr1:4024990-402519	2	ATTATT	0.884969	188	+
>chr1:3467418-346761	1	ATTATT	0.884969	24	-
>chr1:9978791-997899	50	ATCATT	0.874651	77	-
>chr1:9932599-993279	45	ATCATT	0.874651	18	+
>chr1:9013525-901372	37	ATCATT	0.874651	40	-
>chr1:7444756-744495	33	ATCATT	0.874651	104	-
>chr1:6277750-627795	16	ATCATT	0.874651	98	+
>chr1:6205539-620573	13	ATCATT	0.874651	38	+
>chr1:5168670-516887	9	ATCATT	0.874651	30	-
>chr1:4774948-477514	6	ATCATT	0.874651	138	-
>chr1:6472202-647240	20	ATGACT	0.853739	143	-
>chr1:6183701-618390	12	ATGACT	0.853739	175	-
>chr1:4662531-466273	5	ATGACT	0.853739	126	+
>chr1:9942670-994287	46	ACGATT	0.805545	105	-
>chr1:4833767-483396	7	ACGATT	0.805545	63	-
>chr1:4662531-466273	5	ACGATT	0.805545	58	-
**********

16)	AGTATT	(AATACT)	1.664

Matrix: MAT16	AGTATT
A	0.8169	0.03667	0.1017	0.7024	0.1984	0.05968	
C	0.01586	0.0534	0.06469	0.08485	0.01561	0.04079	
G	0.03184	0.739	0.03857	0.072	0.06428	0.04865	
T	0.1354	0.1709	0.7951	0.1407	0.7217	0.8509	

OCCURRENCES:
>chr1:9574131-957433	42	AGTATT	1	164	-
>chr1:8851545-885174	36	AGTATT	1	143	-
>chr1:7444756-744495	33	AGTATT	1	137	-
>chr1:7388801-738900	31	AGTATT	1	75	-
>chr1:7209035-720923	26	AGTATT	1	10	-
>chr1:6262414-626261	14	AGTATT	1	181	+
>chr1:5805347-580554	10	AGTATT	1	152	+
>chr1:4833767-483396	7	AGTATT	1	18	+
>chr1:4402453-440265	3	AGTATT	1	177	+
>chr1:9978791-997899	50	AGTAAT	0.881262	31	-
>chr1:9568576-956877	41	AGTAAT	0.881262	154	+
>chr1:9013525-901372	37	AGTAAT	0.881262	183	+
>chr1:7209035-720923	26	AGTAAT	0.881262	183	-
>chr1:6878570-687877	25	AGTAAT	0.881262	64	+
>chr1:6719561-671976	22	AGTAAT	0.881262	137	-
>chr1:6588721-658892	21	AGTAAT	0.881262	9	+
>chr1:6472202-647240	20	AGTAAT	0.881262	176	+
>chr1:6472202-647240	20	AGTAAT	0.881262	29	+
>chr1:6360131-636033	17	AGTAAT	0.881262	86	-
>chr1:6262414-626261	14	AGTAAT	0.881262	160	-
>chr1:6090845-609104	11	AGTAAT	0.881262	20	+
>chr1:5805347-580554	10	AGTAAT	0.881262	176	+
>chr1:5072821-507302	8	AGTAAT	0.881262	46	-
>chr1:4774948-477514	6	AGTAAT	0.881262	194	+
>chr1:3467418-346761	1	AGTAAT	0.881262	32	-
>chr1:9962925-996312	49	ATTATT	0.871068	188	-
>chr1:9962925-996312	49	ATTATT	0.871068	133	+
>chr1:9942670-994287	46	ATTATT	0.871068	73	+
>chr1:8797248-879744	35	ATTATT	0.871068	192	+
>chr1:6878570-687877	25	ATTATT	0.871068	41	-
>chr1:6719561-671976	22	ATTATT	0.871068	181	-
>chr1:6719561-671976	22	ATTATT	0.871068	145	-
>chr1:6472202-647240	20	ATTATT	0.871068	5	+
>chr1:6437830-643803	19	ATTATT	0.871068	126	-
>chr1:6396504-639670	18	ATTATT	0.871068	55	+
>chr1:6090845-609104	11	ATTATT	0.871068	84	+
>chr1:6090845-609104	11	ATTATT	0.871068	43	+
>chr1:5805347-580554	10	ATTATT	0.871068	65	-
>chr1:4024990-402519	2	ATTATT	0.871068	188	+
>chr1:3467418-346761	1	ATTATT	0.871068	24	-
>chr1:9956513-995671	48	TGTATT	0.845348	68	-
>chr1:9948240-994844	47	TGTATT	0.845348	84	+
>chr1:9942670-994287	46	TGTATT	0.845348	156	-
>chr1:9574131-957433	42	TGTATT	0.845348	48	+
>chr1:7768736-776893	34	TGTATT	0.845348	126	+
>chr1:5072821-507302	8	TGTATT	0.845348	43	+
>chr1:4024990-402519	2	TGTATT	0.845348	173	+
>chr1:3467418-346761	1	TGTATT	0.845348	114	+
>chr1:3467418-346761	1	TGTATT	0.845348	27	-
>chr1:3467418-346761	1	TGTATT	0.845348	5	-
**********

17)	TTGAGT	(ACTCAA)	1.574

Matrix: MAT17	TTGAGT
A	0.1122	0.08252	0.1535	0.8677	0.167	0.08711	
C	0.05038	0.01835	0.1439	0.01705	0.09193	0.05017	
G	0.1	0.04409	0.647	0.02826	0.5944	0.03802	
T	0.7373	0.855	0.05572	0.08702	0.1467	0.8247	

OCCURRENCES:
>chr1:9978791-997899	50	TTGAGT	1	34	-
>chr1:9956513-995671	48	TTGAGT	1	83	-
>chr1:9574131-957433	42	TTGAGT	1	43	+
>chr1:9568576-956877	41	TTGAGT	1	90	+
>chr1:8851545-885174	36	TTGAGT	1	94	-
>chr1:7413722-741392	32	TTGAGT	1	165	+
>chr1:7388801-738900	31	TTGAGT	1	78	-
>chr1:7309743-730994	28	TTGAGT	1	133	+
>chr1:7209035-720923	26	TTGAGT	1	90	+
>chr1:6719561-671976	22	TTGAGT	1	140	-
>chr1:6262414-626261	14	TTGAGT	1	132	+
>chr1:6183701-618390	12	TTGAGT	1	56	+
>chr1:5072821-507302	8	TTGAGT	1	174	-
>chr1:4833767-483396	7	TTGAGT	1	3	+
>chr1:9942670-994287	46	TTGAAT	0.89953	162	+
>chr1:7444756-744495	33	TTGAAT	0.89953	134	+
>chr1:7413722-741392	32	TTGAAT	0.89953	123	-
>chr1:6721868-672206	23	TTGAAT	0.89953	85	+
>chr1:6277750-627795	16	TTGAAT	0.89953	35	-
>chr1:6277750-627795	16	TTGAAT	0.89953	25	+
>chr1:6183701-618390	12	TTGAAT	0.89953	87	+
>chr1:6090845-609104	11	TTGAAT	0.89953	119	-
>chr1:6090845-609104	11	TTGAAT	0.89953	115	+
>chr1:5072821-507302	8	TTGAAT	0.89953	155	-
>chr1:9932599-993279	45	TTGATT	0.89477	47	-
>chr1:9574131-957433	42	TTGATT	0.89477	147	-
>chr1:8851545-885174	36	TTGATT	0.89477	118	-
>chr1:8797248-879744	35	TTGATT	0.89477	7	+
>chr1:6878570-687877	25	TTGATT	0.89477	92	-
>chr1:4833767-483396	7	TTGATT	0.89477	128	+
>chr1:4562216-456241	4	TTGATT	0.89477	144	+
>chr1:4402453-440265	3	TTGATT	0.89477	130	+
>chr1:4024990-402519	2	TTGATT	0.89477	185	+
>chr1:9962925-996312	49	TTAAGT	0.884013	119	-
>chr1:9932599-993279	45	TTAAGT	0.884013	11	+
>chr1:9932599-993279	45	TTAAGT	0.884013	9	-
>chr1:9574131-957433	42	TTAAGT	0.884013	58	-
>chr1:9013525-901372	37	TTAAGT	0.884013	164	+
>chr1:8797248-879744	35	TTAAGT	0.884013	120	+
>chr1:8797248-879744	35	TTAAGT	0.884013	84	-
>chr1:6396504-639670	18	TTAAGT	0.884013	109	-
>chr1:6360131-636033	17	TTAAGT	0.884013	43	-
>chr1:6396504-639670	18	TTGACT	0.881899	34	-
>chr1:4833767-483396	7	TTGACT	0.881899	6	-
>chr1:9813405-981360	44	ATGAGT	0.853079	136	+
>chr1:6588721-658892	21	ATGAGT	0.853079	75	-
>chr1:6472202-647240	20	ATGAGT	0.853079	20	+
>chr1:6277750-627795	16	ATGAGT	0.853079	42	-
>chr1:6262414-626261	14	ATGAGT	0.853079	178	+
>chr1:6205539-620573	13	ATGAGT	0.853079	20	+
**********

18)	TAAAAC	(GTTTTA)	1.572

Matrix: MAT18	TAAAAC
A	0.09976	0.6641	0.8508	0.8037	0.7918	0.1444	
C	0.1021	0.08641	0.05693	0.04963	0.05966	0.5613	
G	0.05432	0.1092	0.04048	0.04923	0.04498	0.06765	
T	0.7438	0.1403	0.05175	0.09743	0.1036	0.2267	

OCCURRENCES:
>chr1:9813405-981360	44	TAAAAC	1	140	-
>chr1:7388801-738900	31	TAAAAC	1	51	+
>chr1:7303541-730374	27	TAAAAC	1	12	+
>chr1:6472202-647240	20	TAAAAC	1	133	-
>chr1:4774948-477514	6	TAAAAC	1	124	+
>chr1:4662531-466273	5	TAAAAC	1	38	+
>chr1:4024990-402519	2	TAAAAC	1	82	+
>chr1:9956513-995671	48	TAAAAT	0.917837	185	-
>chr1:9942670-994287	46	TAAAAT	0.917837	135	+
>chr1:9813405-981360	44	TAAAAT	0.917837	132	+
>chr1:9013525-901372	37	TAAAAT	0.917837	135	+
>chr1:9013525-901372	37	TAAAAT	0.917837	113	+
>chr1:8851545-885174	36	TAAAAT	0.917837	104	+
>chr1:8797248-879744	35	TAAAAT	0.917837	147	+
>chr1:7768736-776893	34	TAAAAT	0.917837	135	+
>chr1:7413722-741392	32	TAAAAT	0.917837	11	-
>chr1:7388801-738900	31	TAAAAT	0.917837	63	-
>chr1:7386917-738711	29	TAAAAT	0.917837	31	+
>chr1:6472202-647240	20	TAAAAT	0.917837	33	-
>chr1:6266967-626716	15	TAAAAT	0.917837	3	+
>chr1:6262414-626261	14	TAAAAT	0.917837	184	-
>chr1:6205539-620573	13	TAAAAT	0.917837	158	+
>chr1:6205539-620573	13	TAAAAT	0.917837	29	+
>chr1:6090845-609104	11	TAAAAT	0.917837	150	-
>chr1:5805347-580554	10	TAAAAT	0.917837	155	-
>chr1:5072821-507302	8	TAAAAT	0.917837	115	+
>chr1:4833767-483396	7	TAAAAT	0.917837	122	+
>chr1:4024990-402519	2	TAAAAT	0.917837	118	+
>chr1:3467418-346761	1	TAAAAT	0.917837	183	-
>chr1:3467418-346761	1	TAAAAT	0.917837	134	-
>chr1:9962925-996312	49	TTAAAC	0.871367	7	+
>chr1:9942670-994287	46	TTAAAC	0.871367	80	+
>chr1:9013525-901372	37	TTAAAC	0.871367	162	-
>chr1:9013525-901372	37	TTAAAC	0.871367	110	-
>chr1:8797248-879744	35	TTAAAC	0.871367	118	-
>chr1:7444756-744495	33	TTAAAC	0.871367	99	-
>chr1:7413722-741392	32	TTAAAC	0.871367	188	-
>chr1:7388801-738900	31	TTAAAC	0.871367	37	+
>chr1:6360131-636033	17	TTAAAC	0.871367	143	+
>chr1:6360131-636033	17	TTAAAC	0.871367	7	-
>chr1:5805347-580554	10	TTAAAC	0.871367	17	+
>chr1:5072821-507302	8	TTAAAC	0.871367	150	-
>chr1:4833767-483396	7	TAAATC	0.831007	94	-
>chr1:4662531-466273	5	TAAATC	0.831007	56	+
>chr1:9574131-957433	42	TAATAC	0.826572	163	+
>chr1:7768736-776893	34	TAATAC	0.826572	127	-
>chr1:5072821-507302	8	TAATAC	0.826572	44	-
>chr1:4833767-483396	7	TAATAC	0.826572	19	-
>chr1:3467418-346761	1	TAATAC	0.826572	26	+
>chr1:3467418-346761	1	TAATAC	0.826572	4	+
**********

19)	GTGAAT	(ATTCAC)	1.568

Matrix: MAT19	GTGAAT
A	0.1593	0.04483	0.06949	0.8955	0.7175	0.1105	
C	0.07553	0.01876	0.09003	0.01629	0.08374	0.06563	
G	0.6152	0.0609	0.7443	0.03019	0.08214	0.05749	
T	0.15	0.8755	0.09618	0.05804	0.1166	0.7664	

OCCURRENCES:
>chr1:9956513-995671	48	GTGAAT	1	79	-
>chr1:7209035-720923	26	GTGAAT	1	156	-
>chr1:6878570-687877	25	GTGAAT	1	53	+
>chr1:6588721-658892	21	GTGAAT	1	30	-
>chr1:6437830-643803	19	GTGAAT	1	123	+
>chr1:6277750-627795	16	GTGAAT	1	29	-
>chr1:6266967-626716	15	GTGAAT	1	15	+
>chr1:6262414-626261	14	GTGAAT	1	174	+
>chr1:5168670-516887	9	GTGAAT	1	154	-
>chr1:4402453-440265	3	GTGAAT	1	133	-
>chr1:4024990-402519	2	GTGAAT	1	62	+
>chr1:9574131-957433	42	ATGAAT	0.89386	83	+
>chr1:9574131-957433	42	ATGAAT	0.89386	51	-
>chr1:9013525-901372	37	ATGAAT	0.89386	117	-
>chr1:8851545-885174	36	ATGAAT	0.89386	86	-
>chr1:7303541-730374	27	ATGAAT	0.89386	171	-
>chr1:7303541-730374	27	ATGAAT	0.89386	107	+
>chr1:6437830-643803	19	ATGAAT	0.89386	130	-
>chr1:6183701-618390	12	ATGAAT	0.89386	71	+
>chr1:5072821-507302	8	ATGAAT	0.89386	127	+
>chr1:5072821-507302	8	ATGAAT	0.89386	87	-
>chr1:5072821-507302	8	ATGAAT	0.89386	21	+
>chr1:9942670-994287	46	TTGAAT	0.891676	162	+
>chr1:7444756-744495	33	TTGAAT	0.891676	134	+
>chr1:7413722-741392	32	TTGAAT	0.891676	123	-
>chr1:6721868-672206	23	TTGAAT	0.891676	85	+
>chr1:6277750-627795	16	TTGAAT	0.891676	35	-
>chr1:6277750-627795	16	TTGAAT	0.891676	25	+
>chr1:6183701-618390	12	TTGAAT	0.891676	87	+
>chr1:6090845-609104	11	TTGAAT	0.891676	119	-
>chr1:6090845-609104	11	TTGAAT	0.891676	115	+
>chr1:5072821-507302	8	TTGAAT	0.891676	155	-
>chr1:9956513-995671	48	GTGATT	0.860082	176	+
>chr1:9932599-993279	45	GTGATT	0.860082	129	-
>chr1:9568576-956877	41	GTGATT	0.860082	22	+
>chr1:9554705-955490	40	GTGATT	0.860082	126	+
>chr1:6472202-647240	20	GTGATT	0.860082	76	+
>chr1:4833767-483396	7	GTGATT	0.860082	188	-
>chr1:3467418-346761	1	GTGATT	0.860082	51	-
>chr1:9956513-995671	48	GTTAAT	0.849088	112	+
>chr1:9932599-993279	45	GTTAAT	0.849088	44	+
>chr1:9574131-957433	42	GTTAAT	0.849088	106	+
>chr1:9554705-955490	40	GTTAAT	0.849088	49	+
>chr1:9013525-901372	37	GTTAAT	0.849088	173	+
>chr1:6721868-672206	23	GTTAAT	0.849088	172	-
>chr1:4662531-466273	5	GTTAAT	0.849088	159	-
>chr1:9942670-994287	46	GTCAAT	0.847655	91	-
>chr1:7768736-776893	34	GTCAAT	0.847655	76	+
>chr1:7444756-744495	33	GTCAAT	0.847655	10	+
>chr1:7209035-720923	26	GTCAAT	0.847655	123	+
**********

20)	AATACA	(TGTATT)	1.564

Matrix: MAT20	AATACA
A	0.8268	0.7796	0.1396	0.6772	0.1349	0.8374	
C	0.05488	0.04317	0.05118	0.06514	0.7076	0.03498	
G	0.04696	0.05148	0.06801	0.08048	0.04932	0.01976	
T	0.0714	0.1257	0.7412	0.1771	0.1081	0.1079	

OCCURRENCES:
>chr1:9962925-996312	49	AATACA	1	83	+
>chr1:9956513-995671	48	AATACA	1	68	+
>chr1:9948240-994844	47	AATACA	1	84	-
>chr1:9942670-994287	46	AATACA	1	156	+
>chr1:9574131-957433	42	AATACA	1	48	-
>chr1:7768736-776893	34	AATACA	1	126	-
>chr1:5072821-507302	8	AATACA	1	43	-
>chr1:4024990-402519	2	AATACA	1	173	-
>chr1:3467418-346761	1	AATACA	1	114	-
>chr1:3467418-346761	1	AATACA	1	27	+
>chr1:3467418-346761	1	AATACA	1	5	+
>chr1:9956513-995671	48	AATTCA	0.883548	78	+
>chr1:9942670-994287	46	AATTCA	0.883548	163	-
>chr1:9013525-901372	37	AATTCA	0.883548	116	+
>chr1:8851545-885174	36	AATTCA	0.883548	85	+
>chr1:7303541-730374	27	AATTCA	0.883548	56	+
>chr1:6878570-687877	25	AATTCA	0.883548	86	-
>chr1:6878570-687877	25	AATTCA	0.883548	54	-
>chr1:6721868-672206	23	AATTCA	0.883548	72	+
>chr1:6437830-643803	19	AATTCA	0.883548	129	+
>chr1:6277750-627795	16	AATTCA	0.883548	28	+
>chr1:6277750-627795	16	AATTCA	0.883548	26	-
>chr1:6266967-626716	15	AATTCA	0.883548	16	-
>chr1:6090845-609104	11	AATTCA	0.883548	118	+
>chr1:6090845-609104	11	AATTCA	0.883548	116	-
>chr1:5072821-507302	8	AATTCA	0.883548	154	+
>chr1:9956513-995671	48	AATATA	0.860396	155	-
>chr1:9942670-994287	46	AATATA	0.860396	119	-
>chr1:9813405-981360	44	AATATA	0.860396	31	+
>chr1:9013525-901372	37	AATATA	0.860396	78	+
>chr1:7768736-776893	34	AATATA	0.860396	2	+
>chr1:7413722-741392	32	AATATA	0.860396	87	-
>chr1:7413722-741392	32	AATATA	0.860396	85	+
>chr1:6472202-647240	20	AATATA	0.860396	2	-
>chr1:6360131-636033	17	AATATA	0.860396	26	+
>chr1:9813405-981360	44	ATTACA	0.84772	147	+
>chr1:6878570-687877	25	ATTACA	0.84772	38	-
>chr1:6719561-671976	22	ATTACA	0.84772	127	+
>chr1:6588721-658892	21	ATTACA	0.84772	140	-
>chr1:6090845-609104	11	ATTACA	0.84772	89	-
>chr1:5805347-580554	10	ATTACA	0.84772	147	+
>chr1:5805347-580554	10	ATTACA	0.84772	125	+
>chr1:4833767-483396	7	ATTACA	0.84772	107	-
>chr1:4774948-477514	6	ATTACA	0.84772	9	-
>chr1:7388801-738900	31	AATACT	0.830134	75	+
>chr1:7209035-720923	26	AATACT	0.830134	10	+
>chr1:6262414-626261	14	AATACT	0.830134	181	-
>chr1:5805347-580554	10	AATACT	0.830134	152	-
>chr1:4833767-483396	7	AATACT	0.830134	18	-
>chr1:4402453-440265	3	AATACT	0.830134	177	-
**********