Mercurial > repos > pmac > map_chromosomes

diff test-data/map_chrom_ensembl.txt @ 0:e60f92a8e1c8 draft default tip

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author pmac
date Wed, 01 Jun 2016 03:48:29 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/map_chrom_ensembl.txt	Wed Jun 01 03:48:29 2016 -0400
@@ -0,0 +1,93 @@
+1	chr1	1
+2	chr2	2
+3	chr3	3
+4	chr4	4
+5	chr5	5
+6	chr6	6
+7	chr7	7
+8	chr8	8
+9	chr9	9
+10	chr10	10
+11	chr11	11
+12	chr12	12
+13	chr13	13
+14	chr14	14
+15	chr15	15
+16	chr16	16
+17	chr17	17
+18	chr18	18
+19	chr19	19
+20	chr20	20
+21	chr21	21
+22	chr22	22
+X	chrX	X
+Y	chrY	Y
+MT	chrM	MT
+GL000191.1	chr1_gl000191_random	GL000191.1
+GL000192.1	chr1_gl000192_random	GL000192.1
+GL000193.1	chr4_gl000193_random	GL000193.1
+GL000194.1	chr4_gl000194_random	GL000194.1
+GL000195.1	chr7_gl000195_random	GL000195.1
+GL000196.1	chr8_gl000196_random	GL000196.1
+GL000197.1	chr8_gl000197_random	GL000197.1
+GL000198.1	chr9_gl000198_random	GL000198.1
+GL000199.1	chr9_gl000199_random	GL000199.1
+GL000200.1	chr9_gl000200_random	GL000200.1
+GL000201.1	chr9_gl000201_random	GL000201.1
+GL000202.1	chr11_gl000202_random	GL000202.1
+GL000203.1	chr17_gl000203_random	GL000203.1
+GL000204.1	chr17_gl000204_random	GL000204.1
+GL000205.1	chr17_gl000205_random	GL000205.1
+GL000206.1	chr17_gl000206_random	GL000206.1
+GL000207.1	chr18_gl000207_random	GL000207.1
+GL000208.1	chr19_gl000208_random	GL000208.1
+GL000209.1	chr19_gl000209_random	GL000209.1
+GL000210.1	chr21_gl000210_random	GL000210.1
+GL000211.1	chrUn_gl000211	GL000211.1
+GL000212.1	chrUn_gl000212	GL000212.1
+GL000213.1	chrUn_gl000213	GL000213.1
+GL000214.1	chrUn_gl000214	GL000214.1
+GL000215.1	chrUn_gl000215	GL000215.1
+GL000216.1	chrUn_gl000216	GL000216.1
+GL000217.1	chrUn_gl000217	GL000217.1
+GL000218.1	chrUn_gl000218	GL000218.1
+GL000219.1	chrUn_gl000219	GL000219.1
+GL000220.1	chrUn_gl000220	GL000220.1
+GL000221.1	chrUn_gl000221	GL000221.1
+GL000222.1	chrUn_gl000222	GL000222.1
+GL000223.1	chrUn_gl000223	GL000223.1
+GL000224.1	chrUn_gl000224	GL000224.1
+GL000225.1	chrUn_gl000225	GL000225.1
+GL000226.1	chrUn_gl000226	GL000226.1
+GL000227.1	chrUn_gl000227	GL000227.1
+GL000228.1	chrUn_gl000228	GL000228.1
+GL000229.1	chrUn_gl000229	GL000229.1
+GL000230.1	chrUn_gl000230	GL000230.1
+GL000231.1	chrUn_gl000231	GL000231.1
+GL000232.1	chrUn_gl000232	GL000232.1
+GL000233.1	chrUn_gl000233	GL000233.1
+GL000234.1	chrUn_gl000234	GL000234.1
+GL000235.1	chrUn_gl000235	GL000235.1
+GL000236.1	chrUn_gl000236	GL000236.1
+GL000237.1	chrUn_gl000237	GL000237.1
+GL000238.1	chrUn_gl000238	GL000238.1
+GL000239.1	chrUn_gl000239	GL000239.1
+GL000240.1	chrUn_gl000240	GL000240.1
+GL000241.1	chrUn_gl000241	GL000241.1
+GL000242.1	chrUn_gl000242	GL000242.1
+GL000243.1	chrUn_gl000243	GL000243.1
+GL000244.1	chrUn_gl000244	GL000244.1
+GL000245.1	chrUn_gl000245	GL000245.1
+GL000246.1	chrUn_gl000246	GL000246.1
+GL000247.1	chrUn_gl000247	GL000247.1
+GL000248.1	chrUn_gl000248	GL000248.1
+GL000249.1	chrUn_gl000249	GL000249.1
+HSCHR4_1	chr4_ctg9_hap1	HSCHR4_1
+HSCHR6_MHC_APD	chr6_apd_hap1	HSCHR6_MHC_APD
+HSCHR6_MHC_COX	chr6_cox_hap2	HSCHR6_MHC_COX
+HSCHR6_MHC_DBB	chr6_dbb_hap3	HSCHR6_MHC_DBB
+HSCHR6_MHC_MANN	chr6_mann_hap4	HSCHR6_MHC_MANN
+HSCHR6_MHC_MCF	chr6_mcf_hap5	HSCHR6_MHC_MCF
+HSCHR6_MHC_QBL	chr6_qbl_hap6	HSCHR6_MHC_QBL
+HSCHR6_MHC_SSTO	chr6_ssto_hap7	HSCHR6_MHC_SSTO
+HSCHR17_1	chr17_ctg5_hap1	HSCHR17_1