comparison breakdancer.xml @ 1:8c1e654262b1 draft default tip

planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty

0:694cbef83948

        <param name="allele_freq" type="boolean" checked="false" truevalue="-h" falsevalue=""
               label="Print out Allele Frequencing column (Default= No)"/>
        <param name="output_score_filter" type="integer" value="30" label="Output Score filter"/>
    </inputs>
    <outputs>
        <data name="results_bed" type="data" format="bed" help="BED file containing SVs and supporting reads" label="${sample_name}.bed"/>
    </outputs>
    <tests>
        <test>
            <param name="input_file" value="X_Hum1.bwa.bam" ftype="bam"/>
            <param name="mean" value="227"/>

1:8c1e654262b1

        <param name="allele_freq" type="boolean" checked="false" truevalue="-h" falsevalue=""
               label="Print out Allele Frequencing column (Default= No)"/>
        <param name="output_score_filter" type="integer" value="30" label="Output Score filter"/>
    </inputs>
    <outputs>
        <data name="results_bed" type="data" format="bed" help="BED file containing SVs and supporting reads" label="${sample_name}"/>
    </outputs>
    <tests>
        <test>
            <param name="input_file" value="X_Hum1.bwa.bam" ftype="bam"/>
            <param name="mean" value="227"/>