Mercurial > repos > portiahollyoak > temp

diff scripts/TEMP_Insertion.sh @ 17:e7d3dc3e0ec9 draft

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planemo upload for repository https://github.com/portiahollyoak/Tools commit 22724a75342e3097cd0976e4bfcfe7a19308ac4f-dirty
author portiahollyoak
date Wed, 15 Jun 2016 10:30:06 -0400
parents ca36262102d8
children 9672fe07a232
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line diff
--- a/scripts/TEMP_Insertion.sh	Tue Jun 14 04:36:25 2016 -0400
+++ b/scripts/TEMP_Insertion.sh	Wed Jun 15 10:30:06 2016 -0400
@@ -156,6 +156,7 @@
 rm tmp
 perl $BINDIR/get_class.pl $i.uniq.transposons.filtered.wGap.bed $i > $i.uniq.transposons.filtered.wGap.class.bed
 perl $BINDIR/make.bp.bed.pl $i.uniq.transposons.filtered.wGap.class.bed $ANNO $FAMI
+echo "got FAMI"
 
 rm $i.unpair.sam $i.unpair.uniq.bed $i.unpair.uniq.?.fastq $i.unpair.uniq.?.sai 
 rm $i.unpair.uniq.transposons.sam $i.unpair.uniq.transposons.unpair.sam $i.uniq.transposons.filtered.woGap.bed $i.uniq.transposons.filtered.wGap.bed