# HG changeset patch
# User portiahollyoak
# Date 1461608317 14400
# Node ID 50c432ca4d1ea5fe0050c40ebb43c1879f3bcad1
# Parent  2d566f713aeca98d262cd9f66eb9133b35ef25b2
planemo upload for repository https://github.com/portiahollyoak/Tools commit 132bb96bba8e7aed66a102ed93b7744f36d10d37-dirty

diff -r 2d566f713aec -r 50c432ca4d1e temp.xml
--- a/temp.xml	Mon Apr 25 14:16:04 2016 -0400
+++ b/temp.xml	Mon Apr 25 14:18:37 2016 -0400
@@ -21,7 +21,8 @@
         mv "$alignment.element_identifier".insertion.refined.bp $insertion_bed_refined &&
         mv "$alignment.element_identifier".insertion.refined.bp.summary $insertion_summary &&
         mv "$alignment.element_identifier".absence.refined.bp.summary $absence_summary &&
-        zip $archive  *insertion* *excision* *absence*
+        zip archive.zip  *insertion* *excision* *absence* &&
+        mv $archive
     ]]></command>
     <inputs>
         <param format="bam" name="alignment" type="data" label="Alignment bam file"/>