Mercurial > repos > portiahollyoak > twobit_to_fasta
changeset 1:290689b572b3 draft
planemo upload for repository https://github.com/portiahollyoak/Tools commit c843a15727005c5e5fb47c26a63e80412b62f03a
| author | portiahollyoak |
|---|---|
| date | Thu, 28 Apr 2016 08:08:11 -0400 |
| parents | 977675b747a2 |
| children | 4d4cfa3a59db |
| files | 2bit_to_fasta.xml twobit_to_fasta.xml |
| diffstat | 2 files changed, 27 insertions(+), 27 deletions(-) [+] |
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--- a/2bit_to_fasta.xml Thu Apr 28 07:52:32 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,27 +0,0 @@ -<tool id ="2bit_to_fasta" name="Convert 2bit to fasta format" version=" 0.1.0"> - <description></description> - <requirements> - <requirement type="package" version="latest">twoBitToFa</requirement> - </requirements> - <stdio> - <exit_code range="1:" /> - </stdio> - <command>twoBitToFa "$input1" "$output" </command> - <inputs> - <param format="twobit" name="input1" type="data" label="twobit File"/> - </inputs> - <outputs> - <data format="fasta" name="output" /> - </outputs> - <tests> - <test> - <param name="input1" value="dm3_chr2L.2bit" ftype="twobit"/> - <output name="output" file="output.fasta"/> - </test> - </tests> - <help> <![CDATA[ - -This tool takes an input 2bit file and converts it into fasta format. - - ]]> </help> -</tool> \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/twobit_to_fasta.xml Thu Apr 28 08:08:11 2016 -0400 @@ -0,0 +1,27 @@ +<tool id ="2bit_to_fasta" name="Convert 2bit to fasta format" version=" 0.1.0"> + <description></description> + <requirements> + <requirement type="package" version="latest">twoBitToFa</requirement> + </requirements> + <stdio> + <exit_code range="1:" /> + </stdio> + <command>twoBitToFa "$input1" "$output" </command> + <inputs> + <param format="twobit" name="input1" type="data" label="twobit File"/> + </inputs> + <outputs> + <data format="fasta" name="output" /> + </outputs> + <tests> + <test> + <param name="input1" value="dm3_chr2L.2bit" ftype="twobit"/> + <output name="output" file="output.fasta"/> + </test> + </tests> + <help> <![CDATA[ + +This tool takes an input 2bit file and converts it into fasta format. + + ]]> </help> +</tool> \ No newline at end of file