Mercurial > repos > ppericard > mixomics_blocksplsda
view matCor_addVar.xml @ 3:0a3c83f2197a draft
planemo upload for repository https://github.com/bilille/galaxy-mixomics-blocksplsda commit 24b8259494ac7ab10cbd1f9ee991f455a7507590-dirty
author | ppericard |
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date | Fri, 25 Oct 2019 07:10:59 -0400 |
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children | b0ab97ffc2a1 |
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<tool id="matCor_addVar" name="matCor_addVar" version="0.2.0" profile="16.04" workflow_compatible="true"> <description></description> <requirements> <requirement type="package" version="6.8">bioconductor-mixomics</requirement> <requirement type="package" version="2.0">r-argparse</requirement> </requirements> <stdio> <!-- <exit_code range="1:" level="fatal" /> --> </stdio> <command detect_errors="aggressive"> <![CDATA[ Rscript ${__tool_directory__}/matCor_addVar_wrapper.R --input_rdata ${input_rdata} --cutoff_comp ${cutoff_comp} --mat_block_Y_file ${mat_block_Y} --output_rdata ${output_rdata} --output_blocks_comb ${output_blocks_comb} ]]> </command> <inputs> <param name="input_rdata" type="data" format="rdata" label="Input RData file from block.SPLSDA"/> <param name="cutoff_comp" type="float" value="0.8" min="0" max="1" label="" help="" /> <param name="mat_block_Y" type="data" format="tabular" label="Matrix Block Y" /> </inputs> <outputs> <data name="output_rdata" format="rdata" label="${tool.name}_output.rdata" /> <data name="output_blocks_comb" format="tabular" label="${tool.name}_blocks_comb.tsv" /> </outputs> <tests> </tests> <help> </help> </tool>