comparison tool_dependencies.xml @ 10:2be86284f28a draft

Uploaded

10:2be86284f28a

<?xml version="1.0"?>
<tool_dependency>
    <package name="vdt" version="0.6">
        <install version="1.0">
	<actions>
                 <action type="download_by_url">https://s3-us-west-2.amazonaws.com/mayo-bic-tools/softsearch/Softsearch2.4.tar.gz
		</action>
		<action type="shell_command">perl ./install.pl --prefix=$INSTALL_DIR</action>
                <action type="shell_command">export PERL5LIB=$PERL5LIB:$INSTALL_DIR:$INSTALL_DIR/lib</action>
		<action type="shell_command">perl script/SoftSearch.pl</action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
         </actions>         
       </install>
     </package>
</tool_dependency>