view test-data/MTBLS30-w4m-variable-metadata.tsv @ 0:1883d5274962 draft

"planemo upload commit 8feeae9c62e2026c018e970bb2252e75e1433058"
author prog
date Wed, 08 Jan 2020 09:56:00 -0500
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"variable.name"	"database_identifier"	"chemical_formula"	"smiles"	"inchi"	"metabolite_identification"	"mass_to_charge"	"fragmentation"	"modifications"	"charge"	"retention_time"	"taxid"	"species"	"database"	"database_version"	"reliability"	"uri"	"search_engine"	"search_engine_score"	"smallmolecule_abundance_sub"	"smallmolecule_abundance_stdev_sub"	"smallmolecule_abundance_std_error_sub"
"X"	"CHEBI:78320"	"C3H6O3"	"CC(O)C(O)=O"	"InChI=1S/C3H6O3/c1-2(4)3(5)6/h2,4H,1H3,(H,5,6)"	"b-lactate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"
"X.1"	"CHEBI:32816"	"C3H4O3"	"CC(=O)C(O)=O"	"InChI=1S/C3H4O3/c1-2(4)3(5)6/h1H3,(H,5,6)"	"pyruvate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"
"X.2"	"CHEBI:15741"	"C4H6O4"	"OC(=O)CCC(O)=O"	"InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8)"	"succinate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"
"X.3"	"CHEBI:18012"	"C4H4O4"	"OC(=O)\C=C\C(O)=O"	"InChI=1S/C4H4O4/c5-3(6)1-2-4(7)8/h1-2H,(H,5,6)(H,7,8)/b2-1+"	"fumarate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"
"X.4"	"CHEBI:6650"	"C4H6O5"	"OC(CC(O)=O)C(O)=O"	"InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)"	"malate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"
"X.5"	"CHEBI:30915"	"C5H6O5"	"OC(=O)CCC(=O)C(O)=O"	"InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)"	"ketoglutarate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"
"X.6"	"CHEBI:30769"	"C6H8O7"	"OC(=O)CC(O)(CC(O)=O)C(O)=O"	"InChI=1S/C6H8O7/c7-3(8)1-6(13,5(11)12)2-4(9)10/h13H,1-2H2,(H,7,8)(H,9,10)(H,11,12)"	"citrate"	"NA"	"NA"	"NA"	"NA"	"NA"	"NCBITAXON:http://purl.bioontology.org/ontology/NCBITAXON/10090"	"Mus musculus"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"	"NA"