diff README.md @ 6:f86fec07f392 draft default tip

planemo upload commit c397cd8a93953798d733fd62653f7098caac30ce

--- a/README.md	Wed Apr 19 10:00:05 2017 -0400
+++ b/README.md	Fri Feb 22 16:04:22 2019 -0500
@@ -9,28 +9,41 @@
 
 For more information, see the galaxy tool page, help section, available inside `galaxy/lcmsmatching.xml`.
 
-## search-mz
+## lcmsmatching script
 
-This is the script, included in this repository, that allows run on command line an MZ matching on one of the available database types.
+This is the script, included in this repository, that allows to run on command line an MZ matching on one of the available database types.
 
-Please run `search-mz -h` for a help page listing all options and presenting some examples.
+Please run `lcmsmatching -h` for a help page listing all options and presenting some examples.
 
 ## Dependencies
 
- * `libssl-dev`.
- * `libcurl4-openssl-dev`.
- * `libxml2-dev`.
- * `R` version `3.2.2`.
+ * `R` version `3.5.1`.
  * `R` packages:
    - `getopt` >= `1.20.0`.
-   - `stringr` >= `1.0.0`.
-   - `plyr` >= `1.8.3`.
-   - `XML` >= `3.98`.
-   - `bitops` >= `1.0_6`.
-   - `RCurl` >= `1.95`.
-   - `jsonlite` >= `1.1`.
+   - `biodb` >= `1.2.0rc2`.
+
+## Changelog
+
+### 4.0.2
+
+   * Increase getopt version to 1.20.2.
+
+### 4.0.1
+
+   * Downgrade to Galaxy 18.05. Test in both 18.05 and 18.09.
 
-## Updates
+### 4.0.0
+
+   * Switch to biodb R library (<http://github.com/pkrog/biodb>).
+   * Remove Excel and 4TabSql databases from script.
+   * Remove all dynamic fields in XML (i.e.: fields computed using python scripts, like the list of chromatogaphic columns).
+   * Use now a single field for in-house file databases column names, whose value is a comma separated list of key/value pairs.
+   * Update Peakforest URL.
+
+### 3.4.3
+
+   * Returns empty match in case of NA values in mz.low and mz.high.
+   * Speed up HTML output writing.
 
 ### 3.3.1