Mercurial > repos > proteomisc > preprocess_dataset

changeset 29:d0f05795e9b0 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author proteomisc
date Tue, 05 Dec 2023 12:16:17 +0000
parents 183b24bc8574
children 9d2343a87802
files preprocess_datasets/Affymetrix_Preprocessing.R
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/preprocess_datasets/Affymetrix_Preprocessing.R	Mon Dec 04 12:47:12 2023 +0000
+++ b/preprocess_datasets/Affymetrix_Preprocessing.R	Tue Dec 05 12:16:17 2023 +0000
@@ -82,7 +82,8 @@
 
 AffymetrixRmd=file_path("Affymetrix.Rmd")
 Style=file_path("look.css")
-suppressWarnings(suppressMessages(markdownToHTML(AffymetrixRmd,output="PreprocessingPlots.html", stylesheet=Style)))
+suppressWarnings(suppressMessages(knit(AffymetrixRmd,output="PreprocessingPlots.html",quiet = T)))
+#suppressWarnings(suppressMessages(markdownToHTML(AffymetrixRmd,output="PreprocessingPlots.html", stylesheet=Style)))
 #suppressWarnings(suppressMessages(knit2html(AffymetrixRmd,output="PreprocessingPlots.html",quiet = T)))
 rm(listArguments)
 save.image("MicroArray.Preprocessing.RData")