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comparison test-data/input_test.txt @ 7:4609346d8108 draft

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date Tue, 18 Dec 2018 09:21:32 -0500
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6:5e16cec55146 7:4609346d8108
1 Protein accession number (UniProt) Protein name Number of peptides (razor + unique) Ensembl Gene Gene description RNA tissue category RNA TS TPM
2 P15924 Desmoplakin 69 ENSG00000096696 DSP Desmoplakin Group enriched esophagus: 346.9;skin: 1019.0
3 P02538 Keratin, type II cytoskeletal 6A 53 ENSG00000205420 KRT6A Keratin 6A, type II Tissue enriched esophagus: 5726.3
4 P02768 Serum albumin 44 ENSG00000163631 ALB Albumin Tissue enriched liver: 105632.0
5 P08779 Keratin, type I cytoskeletal 16 29 ENSG00000186832 KRT16 Keratin 16, type I Group enriched esophagus: 479.6;tonsil: 106.5
6 Q02413 Desmoglein-1 24 ENSG00000134760 DSG1 Desmoglein 1 Tissue enriched skin: 727.4
7 P07355 Annexin A2;Putative annexin A2-like protein 22 ENSG00000182718 ANXA2 Annexin A2 Expressed in all NA
8 P14923 Junction plakoglobin 22 ENSG00000173801 JUP Junction plakoglobin Group enriched esophagus: 493.6;skin: 787.3
9 P02788 Lactotransferrin 21 ENSG00000012223 LTF Lactotransferrin Tissue enhanced bone marrow: 2808.6;cervix, uterine: 1024.2
10 Q9HC84 Mucin-5B 21 ENSG00000117983 MUC5B Mucin 5B, oligomeric mucus/gel-forming Group enriched cervix, uterine: 347.7;gallbladder: 346.8
11 P29508 Serpin B3 20 ENSG00000057149 SERPINB3 Serpin peptidase inhibitor, clade B (ovalbumin), member 3 Group enriched cervix, uterine: 297.6;esophagus: 851.2
12 P63261 Actin, cytoplasmic 2 19 ENSG00000184009 ACTG1 Actin gamma 1 Expressed in all NA
13 Q8N1N4 Keratin, type II cytoskeletal 78 18 ENSG00000170423 KRT78 Keratin 78, type II Tissue enriched esophagus: 1058.9
14 Q04695 Keratin, type I cytoskeletal 17 18 ENSG00000128422 KRT17 Keratin 17, type I Tissue enhanced breast: 219.7;seminal vesicle: 223.4;urinary bladder: 334.2
15 P01876 Ig alpha-1 chain C region 16 ENSG00000211895; ENSG00000282633 NA NA NA NA
16 Q01469 Fatty acid-binding protein 5, epidermal 15 ENSG00000164687 FABP5 Fatty acid binding protein 5 (psoriasis-associated) Expressed in all NA
17 P31944 Caspase-14 15 ENSG00000105141 CASP14 Caspase 14, apoptosis-related cysteine peptidase Tissue enriched skin: 560.0
18 P01833 Polymeric immunoglobulin receptor 15 ENSG00000162896 PIGR Polymeric immunoglobulin receptor Tissue enhanced colon: 1721.7;duodenum: 2732.8
19 P06733 Alpha-enolase 15 ENSG00000074800 ENO1 Enolase 1, (alpha) Expressed in all NA
20 Q15149 Plectin 15 ENSG00000178209 PLEC Plectin Expressed in all NA
21 P19013 Keratin, type II cytoskeletal 4 13 ENSG00000170477 KRT4 Keratin 4, type II Tissue enriched esophagus: 14911.0
22 Q6KB66 Keratin, type II cytoskeletal 80 13 ENSG00000167767 KRT80 Keratin 80, type II Tissue enhanced skin: 125.3
23 Q08188 Protein-glutamine gamma-glutamyltransferase E 12 ENSG00000125780 TGM3 Transglutaminase 3 Tissue enriched esophagus: 1519.7
24 P13646 Keratin, type I cytoskeletal 13 11 ENSG00000171401 KRT13 Keratin 13, type I Tissue enriched esophagus: 35268.3
25 Q86YZ3 Hornerin 11 ENSG00000197915 HRNR Hornerin Not detected NA
26 P04259 Keratin, type II cytoskeletal 6B 10 ENSG00000185479 KRT6B Keratin 6B, type II Tissue enriched esophagus: 673.4
27 P02545 Prelamin-A/C;Lamin-A/C 10 ENSG00000160789 LMNA Lamin A/C Expressed in all NA
28 P04083 Annexin A1 10 ENSG00000135046 ANXA1 Annexin A1 Tissue enriched esophagus: 7577.8
29 P11021 78 kDa glucose-regulated protein 10 ENSG00000044574 HSPA5 Heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) Expressed in all NA
30 P02787 Serotransferrin 9 ENSG00000091513 TF Transferrin Tissue enriched liver: 5384.6
31 P04040 Catalase 9 ENSG00000121691 CAT Catalase Expressed in all NA
32 P31151 Protein S100-A7 9 ENSG00000143556 S100A7 S100 calcium binding protein A7 Group enriched skin: 325.1;tonsil: 921.8
33 P31947 14-3-3 protein sigma 9 ENSG00000175793 SFN Stratifin Group enriched esophagus: 1094.4;skin: 1158.9
34 Q96P63 Serpin B12 9 ENSG00000166634 SERPINB12 Serpin peptidase inhibitor, clade B (ovalbumin), member 12 Tissue enriched skin: 78.4
35 P14618 Pyruvate kinase PKM 9 ENSG00000067225 PKM Pyruvate kinase, muscle Expressed in all NA
36 P60174 Triosephosphate isomerase 9 ENSG00000111669 TPI1 Triosephosphate isomerase 1 Expressed in all NA
37 Q06830 Peroxiredoxin-1 9 ENSG00000117450 PRDX1 Peroxiredoxin 1 Expressed in all NA
38 P01040 Cystatin-A 8 ENSG00000121552 CSTA Cystatin A (stefin A) Group enriched esophagus: 3891.8;tonsil: 868.8
39 P05089 Arginase-1 8 ENSG00000118520 ARG1 Arginase 1 Tissue enhanced bone marrow: 171.2;liver: 564.5
40 P01834 Ig kappa chain C region 8 NA NA NA NA NA
41 P04406 Glyceraldehyde-3-phosphate dehydrogenase 8 ENSG00000111640 GAPDH Glyceraldehyde-3-phosphate dehydrogenase Expressed in all NA
42 P0DMV9 Heat shock 70 kDa protein 1B 8 ENSG00000204388; ENSG00000224501; ENSG00000212866; ENSG00000231555; ENSG00000232804 HSPA1B Heat shock 70kDa protein 1B Tissue enhanced adrenal gland: 34.3
43 P13639 Elongation factor 2 8 ENSG00000167658 EEF2 Eukaryotic translation elongation factor 2 Expressed in all NA
44 P35579 Myosin-9 8 ENSG00000100345 MYH9 Myosin, heavy chain 9, non-muscle Expressed in all NA
45 P68371 Tubulin beta-4B chain 8 ENSG00000188229 TUBB4B Tubulin, beta 4B class IVb Expressed in all NA
46 Q8WVV4 Protein POF1B 8 ENSG00000124429 POF1B Premature ovarian failure, 1B Tissue enhanced skin: 144.8
47 O75635 Serpin B7 7 ENSG00000166396 SERPINB7 Serpin peptidase inhibitor, clade B (ovalbumin), member 7 Tissue enhanced skin: 123.8;tonsil: 35.5
48 P01857 Ig gamma-1 chain C region 7 ENSG00000211896; ENSG00000277633 NA NA NA NA
49 P61626 Lysozyme C 7 ENSG00000090382 LYZ Lysozyme Expressed in all NA
50 P68363 Tubulin alpha-1B chain 7 ENSG00000123416 TUBA1B Tubulin, alpha 1b Expressed in all NA
51 P01009 Alpha-1-antitrypsin;Short peptide from AAT 6 ENSG00000197249 SERPINA1 Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 Tissue enriched liver: 15340.0
52 P07900 Heat shock protein HSP 90-alpha 6 ENSG00000080824 HSP90AA1 Heat shock protein 90kDa alpha (cytosolic), class A member 1 Expressed in all NA
53 Q9NZH8 Interleukin-36 gamma 6 ENSG00000136688 IL36G Interleukin 36, gamma Group enriched skin: 15.8;tonsil: 40.8
54 O43707 Alpha-actinin-4;Alpha-actinin-1 6 ENSG00000130402; ENSG00000282844 ACTN4 Actinin, alpha 4 Expressed in all NA
55 O75223 Gamma-glutamylcyclotransferase 6 ENSG00000006625 GGCT Gamma-glutamylcyclotransferase Expressed in all NA
56 P00338 L-lactate dehydrogenase A chain 6 ENSG00000134333 LDHA Lactate dehydrogenase A Expressed in all NA
57 P07339 Cathepsin D 6 ENSG00000117984 CTSD Cathepsin D Expressed in all NA
58 P62987 Ubiquitin-60S ribosomal protein L40 6 ENSG00000221983 UBA52 Ubiquitin A-52 residue ribosomal protein fusion product 1 Expressed in all NA
59 P10599 Thioredoxin 6 ENSG00000136810 TXN Thioredoxin Expressed in all NA
60 Q9UGM3 Deleted in malignant brain tumors 1 protein 6 ENSG00000187908 DMBT1 Deleted in malignant brain tumors 1 Tissue enhanced duodenum: 876.2;small intestine: 299.5
61 Q9UI42 Carboxypeptidase A4 6 ENSG00000128510 CPA4 Carboxypeptidase A4 Tissue enriched skin: 68.0
62 P47929 Galectin-7 5 ENSG00000178934; ENSG00000205076; ENSG00000282902; ENSG00000283082 LGALS7B Lectin, galactoside-binding, soluble, 7B Tissue enhanced breast: 10.2;esophagus: 19.4
63 Q13867 Bleomycin hydrolase 5 ENSG00000108578 BLMH Bleomycin hydrolase Expressed in all NA
64 Q6P4A8 Phospholipase B-like 1 5 ENSG00000121316 PLBD1 Phospholipase B domain containing 1 Expressed in all NA
65 O75369 Filamin-B 5 ENSG00000136068 FLNB Filamin B, beta Expressed in all NA
66 P00441 Superoxide dismutase [Cu-Zn] 5 ENSG00000142168 SOD1 Superoxide dismutase 1, soluble Expressed in all NA
67 P04792 Heat shock protein beta-1 5 ENSG00000106211 HSPB1 Heat shock 27kDa protein 1 Expressed in all NA
68 P11142 Heat shock cognate 71 kDa protein 5 ENSG00000109971 HSPA8 Heat shock 70kDa protein 8 Expressed in all NA
69 P58107 Epiplakin 5 ENSG00000261150 EPPK1 Epiplakin 1 Tissue enhanced skin: 11.2
70 P60842 Eukaryotic initiation factor 4A-I 5 ENSG00000161960 EIF4A1 Eukaryotic translation initiation factor 4A1 Expressed in all NA
71 P62937 Peptidyl-prolyl cis-trans isomerase A 5 ENSG00000196262 PPIA Peptidylprolyl isomerase A (cyclophilin A) Expressed in all NA
72 P63104 14-3-3 protein zeta/delta 5 ENSG00000164924 YWHAZ Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta Expressed in all NA
73 Q92820 Gamma-glutamyl hydrolase 5 ENSG00000137563 GGH Gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) Tissue enhanced kidney: 89.2
74 O75342 Arachidonate 12-lipoxygenase, 12R-type 4 ENSG00000179477 ALOX12B Arachidonate 12-lipoxygenase, 12R type Group enriched skin: 70.1;tonsil: 18.1
75 P09211 Glutathione S-transferase P 4 ENSG00000084207 GSTP1 Glutathione S-transferase pi 1 Expressed in all NA
76 P31025 Lipocalin-1 4 ENSG00000160349 LCN1 Lipocalin 1 Group enriched fallopian tube: 3.0;seminal vesicle: 12.1
77 P48594 Serpin B4 4 ENSG00000206073 SERPINB4 Serpin peptidase inhibitor, clade B (ovalbumin), member 4 Group enriched esophagus: 98.6;urinary bladder: 20.1
78 Q14574 Desmocollin-3 4 ENSG00000134762 DSC3 Desmocollin 3 Group enriched esophagus: 119.5;skin: 455.7
79 Q5T750 Skin-specific protein 32 4 ENSG00000198854 C1orf68 Chromosome 1 open reading frame 68 Tissue enriched skin: 807.2
80 Q6UWP8 Suprabasin 4 ENSG00000189001 SBSN Suprabasin Group enriched esophagus: 1059.9;skin: 2694.5
81 O60911 Cathepsin L2 4 ENSG00000136943 CTSV Cathepsin V Tissue enhanced cervix, uterine: 68.9;skin: 64.3;testis: 131.2
82 P00558 Phosphoglycerate kinase 1 4 ENSG00000102144 PGK1 Phosphoglycerate kinase 1 Expressed in all NA
83 P04075 Fructose-bisphosphate aldolase A 4 ENSG00000149925 ALDOA Aldolase A, fructose-bisphosphate Tissue enriched skeletal muscle: 9379.1
84 P07384 Calpain-1 catalytic subunit 4 ENSG00000014216 CAPN1 Calpain 1, (mu/I) large subunit Expressed in all NA
85 P0CG05 Ig lambda-2 chain C regions 4 NA NA NA NA NA
86 P18206 Vinculin 4 ENSG00000035403 VCL Vinculin Expressed in all NA
87 P62258 14-3-3 protein epsilon 4 ENSG00000108953; ENSG00000274474 YWHAE Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon Expressed in all NA
88 P68871 Hemoglobin subunit beta 4 ENSG00000244734 HBB Hemoglobin, beta Tissue enriched bone marrow: 78261.0
89 Q9C075 Keratin, type I cytoskeletal 23 4 ENSG00000108244; ENSG00000263309 KRT23 Keratin 23, type I Tissue enhanced placenta: 68.3;skin: 71.0
90 A8K2U0 Alpha-2-macroglobulin-like protein 1 3 ENSG00000166535 A2ML1 Alpha-2-macroglobulin-like 1 Tissue enriched esophagus: 480.8
91 P00738 Haptoglobin 3 ENSG00000257017 HP Haptoglobin Tissue enriched liver: 28321.0
92 P01011 Alpha-1-antichymotrypsin 3 ENSG00000196136 SERPINA3 Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 Group enriched cervix, uterine: 133.1;liver: 607.5
93 P02763 Alpha-1-acid glycoprotein 1 3 ENSG00000229314 ORM1 Orosomucoid 1 Tissue enriched liver: 10546.0
94 P18510 Interleukin-1 receptor antagonist protein 3 ENSG00000136689 IL1RN Interleukin 1 receptor antagonist Tissue enhanced esophagus: 1248.5
95 P22528 Cornifin-B 3 ENSG00000169469 SPRR1B Small proline-rich protein 1B Tissue enriched esophagus: 2466.0
96 P30740 Leukocyte elastase inhibitor 3 ENSG00000021355 SERPINB1 Serpin peptidase inhibitor, clade B (ovalbumin), member 1 Expressed in all NA
97 P80188 Neutrophil gelatinase-associated lipocalin 3 ENSG00000148346 LCN2 Lipocalin 2 Tissue enhanced bone marrow: 1855.7;gallbladder: 3437.6
98 Q15828 Cystatin-M 3 ENSG00000175315 CST6 Cystatin E/M Tissue enriched skin: 213.3
99 Q9HCY8 Protein S100-A14 3 ENSG00000189334 S100A14 S100 calcium binding protein A14 Tissue enhanced esophagus: 2214.5
100 P01623 Ig kappa chain V-III region 3 NA NA NA NA NA
101 P01877 Ig alpha-2 chain C region 3 ENSG00000211890 NA NA NA NA
102 P06396 Gelsolin 3 ENSG00000148180 GSN Gelsolin Expressed in all NA
103 P14735 Insulin-degrading enzyme 3 ENSG00000119912 IDE Insulin-degrading enzyme Expressed in all NA
104 P20933 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 3 ENSG00000038002 AGA Aspartylglucosaminidase Expressed in all NA
105 P25788 Proteasome subunit alpha type-3 3 ENSG00000100567 PSMA3 Proteasome subunit alpha 3 Expressed in all NA
106 P26641 Elongation factor 1-gamma 3 ENSG00000254772 EEF1G Eukaryotic translation elongation factor 1 gamma Expressed in all NA
107 P36952 Serpin B5 3 ENSG00000206075 SERPINB5 Serpin peptidase inhibitor, clade B (ovalbumin), member 5 Group enriched esophagus: 221.1;skin: 262.5
108 P40926 Malate dehydrogenase, mitochondrial 3 ENSG00000146701 MDH2 Malate dehydrogenase 2, NAD (mitochondrial) Expressed in all NA
109 Q9Y6R7 IgGFc-binding protein 3 ENSG00000281123 NA NA NA NA
110 O95274 Ly6/PLAUR domain-containing protein 3 2 ENSG00000124466 LYPD3 LY6/PLAUR domain containing 3 Group enriched esophagus: 676.5;skin: 594.5
111 P00491 Purine nucleoside phosphorylase 2 ENSG00000198805 PNP Purine nucleoside phosphorylase Expressed in all NA
112 P04080 Cystatin-B 2 ENSG00000160213 CSTB Cystatin B (stefin B) Tissue enriched esophagus: 1836.3
113 P09972 Fructose-bisphosphate aldolase C 2 ENSG00000109107 ALDOC Aldolase C, fructose-bisphosphate Tissue enriched cerebral cortex: 768.7
114 P19012 Keratin, type I cytoskeletal 15 2 ENSG00000171346 KRT15 Keratin 15, type I Group enriched breast: 320.0;esophagus: 787.5;skin: 1012.3
115 P20930 Filaggrin 2 ENSG00000143631 FLG Filaggrin Tissue enriched skin: 549.7
116 Q96FX8 p53 apoptosis effector related to PMP-22 2 ENSG00000112378 PERP PERP, TP53 apoptosis effector Group enriched esophagus: 574.1;skin: 1238.6
117 Q9UIV8 Serpin B13 2 ENSG00000197641 SERPINB13 Serpin peptidase inhibitor, clade B (ovalbumin), member 13 Tissue enriched esophagus: 185.3
118 P01625 Ig kappa chain V-IV region Len 2 NA NA NA NA NA
119 P01765 Ig heavy chain V-III region TIL 2 NA NA NA NA NA
120 P01766 Ig heavy chain V-III region BRO 2 ENSG00000211942; ENSG00000282286 NA NA NA NA
121 P01860 Ig gamma-3 chain C region 2 NA NA NA NA NA
122 P01871 Ig mu chain C region 2 ENSG00000211899; ENSG00000282657 NA NA NA NA
123 P05090 Apolipoprotein D 2 ENSG00000189058 APOD Apolipoprotein D Tissue enriched breast: 4546.8
124 P07858 Cathepsin B 2 ENSG00000164733 CTSB Cathepsin B Expressed in all NA
125 P08865 40S ribosomal protein SA 2 ENSG00000168028 RPSA Ribosomal protein SA Expressed in all NA
126 P11279 Lysosome-associated membrane glycoprotein 1 2 ENSG00000185896 LAMP1 Lysosomal-associated membrane protein 1 Expressed in all NA
127 P13473 Lysosome-associated membrane glycoprotein 2 2 ENSG00000005893 LAMP2 Lysosomal-associated membrane protein 2 Expressed in all NA
128 P19971 Thymidine phosphorylase 2 ENSG00000025708 TYMP Thymidine phosphorylase Tissue enhanced appendix: 103.2
129 P23284 Peptidyl-prolyl cis-trans isomerase B 2 ENSG00000166794 PPIB Peptidylprolyl isomerase B (cyclophilin B) Expressed in all NA
130 P23396 40S ribosomal protein S3 2 ENSG00000149273 RPS3 Ribosomal protein S3 Expressed in all NA
131 P25705 ATP synthase subunit alpha, mitochondrial 2 ENSG00000152234 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle Expressed in all NA
132 P27482 Calmodulin-like protein 3 2 ENSG00000178363 CALML3 Calmodulin-like 3 Tissue enhanced esophagus: 166.4;skin: 42.7
133 P31949 Protein S100-A11 2 ENSG00000163191 S100A11 S100 calcium binding protein A11 Expressed in all NA
134 P40121 Macrophage-capping protein 2 ENSG00000042493 CAPG Capping protein (actin filament), gelsolin-like Expressed in all NA
135 P42357 Histidine ammonia-lyase 2 ENSG00000084110 HAL Histidine ammonia-lyase Group enriched liver: 51.0;skin: 72.6
136 P47756 F-actin-capping protein subunit beta 2 ENSG00000077549 CAPZB Capping protein (actin filament) muscle Z-line, beta Expressed in all NA
137 P48637 Glutathione synthetase 2 ENSG00000100983 GSS Glutathione synthetase Expressed in all NA
138 P49720 Proteasome subunit beta type-3 2 ENSG00000277791; ENSG00000275903 PSMB3 Proteasome subunit beta 3 Expressed in all NA
139 P50395 Rab GDP dissociation inhibitor beta 2 ENSG00000057608 GDI2 GDP dissociation inhibitor 2 Expressed in all NA
140 P59998 Actin-related protein 2/3 complex subunit 4 2 ENSG00000241553 ARPC4 Actin related protein 2/3 complex, subunit 4, 20kDa Expressed in all NA
141 P61160 Actin-related protein 2 2 ENSG00000138071 ACTR2 ARP2 actin-related protein 2 homolog (yeast) Expressed in all NA
142 P61916 Epididymal secretory protein E1 2 ENSG00000119655 NPC2 Niemann-Pick disease, type C2 Tissue enriched epididymis: 16057.0