Mercurial > repos > proteore > proteore_expression_rnaseq_abbased
comparison add_expression_HPA.R @ 15:208b87582b4c draft default tip
"planemo upload commit 9a871575622a1318adc64dad63fa5e3a9d2a19fd"
| author | proteore |
|---|---|
| date | Wed, 29 Apr 2020 08:51:13 -0400 |
| parents | 133309fd6875 |
| children |
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| 14:133309fd6875 | 15:208b87582b4c |
|---|---|
| 145 stopQuietly() | 145 stopQuietly() |
| 146 } | 146 } |
| 147 } | 147 } |
| 148 | 148 |
| 149 convert_to_previous_header <- function(options){ | 149 convert_to_previous_header <- function(options){ |
| 150 header = c('Gene','description','Evidence','Antibody','RNA tissue specificity','Reliability (IH)','Reliability (IF)','Subcellular location','RNA tissue specific NX','TPM max in non-specific') | 150 header = c('Gene','Gene description','Evidence','Antibody','RNA tissue specificity','Reliability (IH)','Reliability (IF)','Subcellular location','RNA tissue specific NX','TPM max in non-specific') |
| 151 names(header) = c('Gene','description','Evidence','Antibody','RNA tissue category','Reliability (IH)','Reliability (IF)','Subcellular location','RNA TS TPM','TPM max in non-specific') | 151 names(header) = c('Gene','Gene description','Evidence','Antibody','RNA tissue category','Reliability (IH)','Reliability (IF)','Subcellular location','RNA TS TPM','TPM max in non-specific') |
| 152 options = names(header[which(header %in% options)]) | 152 options = names(header[which(header %in% options)]) |
| 153 return(options) | 153 return(options) |
| 154 } | 154 } |
| 155 | 155 |
| 156 main = function() { | 156 main = function() { |