Mercurial > repos > proteore > proteore_get_unique_peptide_srm_method

comparison test-data/Lacombe_et_al_2017_modified.tsv @ 0:a2b06836de90 draft

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planemo upload commit f9de6f4e3302c41e64c39d639bee780e5eafd84d-dirty
author proteore
date Fri, 12 Jul 2019 07:49:45 -0400
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1 #Protein accession number (UniProt) Protein name Number of peptides (razor + unique)
2 P15924 Desmoplakin 69
3 P02538 Keratin, type II cytoskeletal 6A 53
4 P02768 Serum albumin 44
5 P08779 Keratin, type I cytoskeletal 16 29
6 Q02413 Desmoglein-1 24
7 P07355 Annexin A2;Putative annexin A2-like protein 22
8 P14923 Junction plakoglobin 22
9 P02788;Q9HC84;P29508 Lactotransferrin 21
10 P63261 Actin, cytoplasmic 2 19
11 Q8N1N4 Keratin, type II cytoskeletal 78 18
12 Q04695 Keratin, type I cytoskeletal 17 18
13 P01876 Ig alpha-1 chain C region 16
14 Q01469 Fatty acid-binding protein 5, epidermal 15
15 Caspase-14 15
16 Polymeric immunoglobulin receptor 15
17 Alpha-enolase 15
18 Zinc-alpha-2-glycoprotein 15
19 Plectin 15
20 Keratin, type II cytoskeletal 4 13
21 Keratin, type II cytoskeletal 80 13
22 Protein-glutamine gamma-glutamyltransferase E 12
23 P13646 Keratin, type I cytoskeletal 13 11
24 Q86YZ3 Hornerin 11
25 P04259 Keratin, type II cytoskeletal 6B 10
26 P02545 Prelamin-A/C;Lamin-A/C 10
27 P04083 Annexin A1 10
28 P11021 78 kDa glucose-regulated protein 10
29 P02787 Serotransferrin 9
30 P04040 Catalase 9
31 P31151 Protein S100-A7 9
32 P31947 14-3-3 protein sigma 9
33 Q96P63 Serpin B12 9
34 P14618 Pyruvate kinase PKM 9
35 P60174 Triosephosphate isomerase 9
36 Q06830 Peroxiredoxin-1 9
37 P01040 Cystatin-A 8
38 P05089 Arginase-1 8
39 P01834 8
40 P04406 8
41 P0DMV9 8
42 P13639 8
43 P35579 8
44 P68371 8
45 Q8WVV4 8
46 O75635 7
47 P01857 7
48 P61626 7
49 P68363 7
50 P01009 6
51 P07900 Heat shock protein HSP 90-alpha 6
52 Q9NZH8 Interleukin-36 gamma 6
53 O43707 Alpha-actinin-4;Alpha-actinin-1 6
54 O75223 Gamma-glutamylcyclotransferase 6
55 P00338 L-lactate dehydrogenase A chain 6
56 P07339 Cathepsin D 6
57 P62987 Ubiquitin-60S ribosomal protein L40 6
58 P10599 Thioredoxin 6
59 Q9UGM3 Deleted in malignant brain tumors 1 protein 6
60 Q9UI42 Carboxypeptidase A4 6
61 P47929 Galectin-7 5
62 Q13867 Bleomycin hydrolase 5
63 Q6P4A8 Phospholipase B-like 1 5
64 O75369 Filamin-B 5
65 P00441 Superoxide dismutase [Cu-Zn] 5
66 P04792 Heat shock protein beta-1 5
67 P11142 Heat shock cognate 71 kDa protein 5
68 P58107 Epiplakin 5
69 P60842 Eukaryotic initiation factor 4A-I 5
70 P62937 Peptidyl-prolyl cis-trans isomerase A 5
71 P63104 14-3-3 protein zeta/delta 5
72 Q92820 Gamma-glutamyl hydrolase 5
73 O75342 Arachidonate 12-lipoxygenase, 12R-type 4
74 P09211 Glutathione S-transferase P 4
75 P31025 Lipocalin-1 4
76 P48594 Serpin B4 4
77 Q14574 Desmocollin-3 4
78 Q5T750 Skin-specific protein 32 4
79 Q6UWP8 Suprabasin 4
80 O60911 Cathepsin L2 4
81 P00558 Phosphoglycerate kinase 1 4
82 P04075 Fructose-bisphosphate aldolase A 4
83 P07384 Calpain-1 catalytic subunit 4
84 P0CG05 Ig lambda-2 chain C regions 4
85 P18206 Vinculin 4
86 P62258 14-3-3 protein epsilon 4
87 P68871 Hemoglobin subunit beta 4
88 Q9C075 Keratin, type I cytoskeletal 23 4
89 A8K2U0 Alpha-2-macroglobulin-like protein 1 3
90 P00738 Haptoglobin 3
91 P01011 Alpha-1-antichymotrypsin 3
92 P02763 Alpha-1-acid glycoprotein 1 3
93 P18510 Interleukin-1 receptor antagonist protein 3
94 P22528 Cornifin-B 3
95 P30740 Leukocyte elastase inhibitor 3
96 P80188 Neutrophil gelatinase-associated lipocalin 3
97 Q15828 Cystatin-M 3
98 Q9HCY8 Protein S100-A14 3
99 P01623 Ig kappa chain V-III region 3
100 P01877 Ig alpha-2 chain C region 3
101 P06396 Gelsolin 3
102 P14735 Insulin-degrading enzyme 3
103 P20933 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 3
104 P25788 Proteasome subunit alpha type-3 3
105 P26641 Elongation factor 1-gamma 3
106 P36952 Serpin B5 3
107 P40926 Malate dehydrogenase, mitochondrial 3
108 Q9Y6R7 IgGFc-binding protein 3
109 O95274 Ly6/PLAUR domain-containing protein 3 2
110 P00491 Purine nucleoside phosphorylase 2
111 P04080 Cystatin-B 2
112 P09972 Fructose-bisphosphate aldolase C 2
113 P19012 Keratin, type I cytoskeletal 15 2
114 P20930 Filaggrin 2
115 Q96FX8 p53 apoptosis effector related to PMP-22 2
116 Q9UIV8 Serpin B13 2
117 P01625 Ig kappa chain V-IV region Len 2
118 P01765 Ig heavy chain V-III region TIL 2
119 P01766 Ig heavy chain V-III region BRO 2
120 P01860 Ig gamma-3 chain C region 2
121 P01871 Ig mu chain C region 2
122 P05090 Apolipoprotein D 2
123 P06870 Kallikrein-1 2
124 P07858 Cathepsin B 2
125 P08865 40S ribosomal protein SA 2
126 P11279 Lysosome-associated membrane glycoprotein 1 2
127 P13473 Lysosome-associated membrane glycoprotein 2 2
128 P19971 Thymidine phosphorylase 2
129 P23284 Peptidyl-prolyl cis-trans isomerase B 2
130 P23396 40S ribosomal protein S3 2
131 P25705 ATP synthase subunit alpha, mitochondrial 2
132 P27482 Calmodulin-like protein 3 2
133 P31949 Protein S100-A11 2
134 P40121 Macrophage-capping protein 2
135 P42357 Histidine ammonia-lyase 2
136 P47756 F-actin-capping protein subunit beta 2
137 P48637 Glutathione synthetase 2
138 P49720 Proteasome subunit beta type-3 2
139 P50395 Rab GDP dissociation inhibitor beta 2
140 P59998 Actin-related protein 2/3 complex subunit 4 2
141 P61160 Actin-related protein 2 2
142 P61916 Epididymal secretory protein E1 2
143 P04745 Alpha-amylase 1 23
144 Q9NZT1 Calmodulin-like protein 5 8
145 P12273 Prolactin-inducible protein 6
146 Q96DA0 Zymogen granule protein 16 homolog B 5
147 P01036 Cystatin-S 5
148 Q8TAX7 Mucin-7 2
149 P01037 Cystatin-SN 2
150 P09228 Cystatin-SA 2
151 P04264 Keratin, type II cytoskeletal 1 61
152 P35908 Keratin, type II cytoskeletal 2 epidermal 40
153 P13645 Keratin, type I cytoskeletal 10 40
154 Q5D862 Filaggrin-2 14
155 Q5T749 Keratinocyte proline-rich protein 13
156 Q8IW75 Serpin A12 3
157 P81605 Dermcidin 3
158 P22531 Small proline-rich protein 2E 3
159 P59666 Neutrophil defensin 3 2
160 P78386 Keratin, type II cuticular Hb5 2