diff id_converter.xml @ 3:72860740f65f draft

planemo upload commit 08f1831e097df5d74bf60ff5955e7e9c8e524cc8-dirty
author proteore
date Wed, 14 Mar 2018 10:13:40 -0400
parents 9b3a4ee0dcc6
children 0584344186eb
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--- a/id_converter.xml	Thu Mar 08 10:39:34 2018 -0500
+++ b/id_converter.xml	Wed Mar 14 10:13:40 2018 -0400
@@ -43,7 +43,7 @@
             <when value="file" >
                 <param name="file" type="data" format="txt,tabular" label="Choose a file that contains your list of IDs" help="" />
                 <param name="header" type="boolean" checked="true" truevalue="true" falsevalue="false" label="Does your input file contain header?" />
-                <param name="ncol" type="text" label="The column number of IDs to map" help='For example, fill in "c1" if it is the first column, "c2" if it is the second column and so on' />                
+                <param name="ncol" type="text" value="c1" label="The column number of IDs to map" help='For example, fill in "c1" if it is the first column, "c2" if it is the second column and so on' />                
             </when>
         </conditional>
 	    <conditional name="idti" >
@@ -176,10 +176,10 @@
 
 This tool converts human IDs using the following source files:
 
-* HUMAN_9606_idmapping_selected.tab
+* HUMAN_9606_idmapping_selected.tab (Uniprot released on 12/2017)
     Tarball downloaded from ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/by_organism/
 
-* nextprot_ac_list_all.txt 
+* nextprot_ac_list_all.txt (Nextprot released on 01/08/2017)
     Downloaded from ftp://ftp.nextprot.org/pub/current_release/ac_lists/
 
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