Mercurial > repos > proteore > proteore_maps_visualization
view tool-data/hsa_pathways.loc @ 5:4a3056be0774 draft
planemo upload commit b8671ffe2e12dc6612b971a3e6e1dc71496aefd0
| author | proteore |
|---|---|
| date | Fri, 24 Jan 2020 05:20:10 -0500 |
| parents | 9845dc9c7323 |
| children |
line wrap: on
line source
#value name hsa00010 Glycolysis / Gluconeogenesis hsa00020 Citrate cycle (TCA cycle) hsa00030 Pentose phosphate pathway hsa00040 Pentose and glucuronate interconversions hsa00051 Fructose and mannose metabolism hsa00052 Galactose metabolism hsa00053 Ascorbate and aldarate metabolism hsa00061 Fatty acid biosynthesis hsa00062 Fatty acid elongation hsa00071 Fatty acid degradation hsa00072 Synthesis and degradation of ketone bodies hsa00100 Steroid biosynthesis hsa00120 Primary bile acid biosynthesis hsa00130 Ubiquinone and other terpenoid-quinone biosynthesis hsa00140 Steroid hormone biosynthesis hsa00190 Oxidative phosphorylation hsa00220 Arginine biosynthesis hsa00230 Purine metabolism hsa00232 Caffeine metabolism hsa00240 Pyrimidine metabolism hsa00250 Alanine, aspartate and glutamate metabolism hsa00260 Glycine, serine and threonine metabolism hsa00270 Cysteine and methionine metabolism hsa00280 Valine, leucine and isoleucine degradation hsa00290 Valine, leucine and isoleucine biosynthesis hsa00310 Lysine degradation hsa00330 Arginine and proline metabolism hsa00340 Histidine metabolism hsa00350 Tyrosine metabolism hsa00360 Phenylalanine metabolism hsa00380 Tryptophan metabolism hsa00400 Phenylalanine, tyrosine and tryptophan biosynthesis hsa00410 beta-Alanine metabolism hsa00430 Taurine and hypotaurine metabolism hsa00440 Phosphonate and phosphinate metabolism hsa00450 Selenocompound metabolism hsa00471 D-Glutamine and D-glutamate metabolism hsa00472 D-Arginine and D-ornithine metabolism hsa00480 Glutathione metabolism hsa00500 Starch and sucrose metabolism hsa00510 N-Glycan biosynthesis hsa00511 Other glycan degradation hsa00512 Mucin type O-glycan biosynthesis hsa00514 Other types of O-glycan biosynthesis hsa00515 Mannose type O-glycan biosynthesis hsa00520 Amino sugar and nucleotide sugar metabolism hsa00524 Neomycin, kanamycin and gentamicin biosynthesis hsa00531 Glycosaminoglycan degradation hsa00532 Glycosaminoglycan biosynthesis hsa00533 Glycosaminoglycan biosynthesis hsa00534 Glycosaminoglycan biosynthesis hsa00561 Glycerolipid metabolism hsa00562 Inositol phosphate metabolism hsa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis hsa00564 Glycerophospholipid metabolism hsa00565 Ether lipid metabolism hsa00590 Arachidonic acid metabolism hsa00591 Linoleic acid metabolism hsa00592 alpha-Linolenic acid metabolism hsa00600 Sphingolipid metabolism hsa00601 Glycosphingolipid biosynthesis hsa00603 Glycosphingolipid biosynthesis hsa00604 Glycosphingolipid biosynthesis hsa00620 Pyruvate metabolism hsa00630 Glyoxylate and dicarboxylate metabolism hsa00640 Propanoate metabolism hsa00650 Butanoate metabolism hsa00670 One carbon pool by folate hsa00730 Thiamine metabolism hsa00740 Riboflavin metabolism hsa00750 Vitamin B6 metabolism hsa00760 Nicotinate and nicotinamide metabolism hsa00770 Pantothenate and CoA biosynthesis hsa00780 Biotin metabolism hsa00785 Lipoic acid metabolism hsa00790 Folate biosynthesis hsa00830 Retinol metabolism hsa00860 Porphyrin and chlorophyll metabolism hsa00900 Terpenoid backbone biosynthesis hsa00910 Nitrogen metabolism hsa00920 Sulfur metabolism hsa00970 Aminoacyl-tRNA biosynthesis hsa00980 Metabolism of xenobiotics by cytochrome P450 hsa00982 Drug metabolism hsa00983 Drug metabolism hsa01040 Biosynthesis of unsaturated fatty acids hsa01100 Metabolic pathways hsa01200 Carbon metabolism hsa01210 2-Oxocarboxylic acid metabolism hsa01212 Fatty acid metabolism hsa01230 Biosynthesis of amino acids hsa01521 EGFR tyrosine kinase inhibitor resistance hsa01522 Endocrine resistance hsa01523 Antifolate resistance hsa01524 Platinum drug resistance hsa02010 ABC transporters hsa03008 Ribosome biogenesis in eukaryotes hsa03010 Ribosome hsa03013 RNA transport hsa03015 mRNA surveillance pathway hsa03018 RNA degradation hsa03020 RNA polymerase hsa03022 Basal transcription factors hsa03030 DNA replication hsa03040 Spliceosome hsa03050 Proteasome hsa03060 Protein export hsa03320 PPAR signaling pathway hsa03410 Base excision repair hsa03420 Nucleotide excision repair hsa03430 Mismatch repair hsa03440 Homologous recombination hsa03450 Non-homologous end-joining hsa03460 Fanconi anemia pathway hsa04010 MAPK signaling pathway hsa04012 ErbB signaling pathway hsa04014 Ras signaling pathway hsa04015 Rap1 signaling pathway hsa04020 Calcium signaling pathway hsa04022 cGMP-PKG signaling pathway hsa04024 cAMP signaling pathway hsa04060 Cytokine-cytokine receptor interaction hsa04062 Chemokine signaling pathway hsa04064 NF-kappa B signaling pathway hsa04066 HIF-1 signaling pathway hsa04068 FoxO signaling pathway hsa04070 Phosphatidylinositol signaling system hsa04071 Sphingolipid signaling pathway hsa04072 Phospholipase D signaling pathway hsa04080 Neuroactive ligand-receptor interaction hsa04110 Cell cycle hsa04114 Oocyte meiosis hsa04115 p53 signaling pathway hsa04120 Ubiquitin mediated proteolysis hsa04122 Sulfur relay system hsa04130 SNARE interactions in vesicular transport hsa04136 Autophagy hsa04137 Mitophagy hsa04140 Autophagy hsa04141 Protein processing in endoplasmic reticulum hsa04142 Lysosome hsa04144 Endocytosis hsa04145 Phagosome hsa04146 Peroxisome hsa04150 mTOR signaling pathway hsa04151 PI3K-Akt signaling pathway hsa04152 AMPK signaling pathway hsa04210 Apoptosis hsa04211 Longevity regulating pathway hsa04213 Longevity regulating pathway hsa04215 Apoptosis hsa04216 Ferroptosis hsa04217 Necroptosis hsa04218 Cellular senescence hsa04260 Cardiac muscle contraction hsa04261 Adrenergic signaling in cardiomyocytes hsa04270 Vascular smooth muscle contraction hsa04310 Wnt signaling pathway hsa04330 Notch signaling pathway hsa04340 Hedgehog signaling pathway hsa04350 TGF-beta signaling pathway hsa04360 Axon guidance hsa04370 VEGF signaling pathway hsa04371 Apelin signaling pathway hsa04380 Osteoclast differentiation hsa04390 Hippo signaling pathway hsa04392 Hippo signaling pathway hsa04510 Focal adhesion hsa04512 ECM-receptor interaction hsa04514 Cell adhesion molecules (CAMs) hsa04520 Adherens junction hsa04530 Tight junction hsa04540 Gap junction hsa04550 Signaling pathways regulating pluripotency of stem cells hsa04610 Complement and coagulation cascades hsa04611 Platelet activation hsa04612 Antigen processing and presentation hsa04614 Renin-angiotensin system hsa04620 Toll-like receptor signaling pathway hsa04621 NOD-like receptor signaling pathway hsa04622 RIG-I-like receptor signaling pathway hsa04623 Cytosolic DNA-sensing pathway hsa04625 C-type lectin receptor signaling pathway hsa04630 Jak-STAT signaling pathway hsa04640 Hematopoietic cell lineage hsa04650 Natural killer cell mediated cytotoxicity hsa04657 IL-17 signaling pathway hsa04658 Th1 and Th2 cell differentiation hsa04659 Th17 cell differentiation hsa04660 T cell receptor signaling pathway hsa04662 B cell receptor signaling pathway hsa04664 Fc epsilon RI signaling pathway hsa04666 Fc gamma R-mediated phagocytosis hsa04668 TNF signaling pathway hsa04670 Leukocyte transendothelial migration hsa04672 Intestinal immune network for IgA production hsa04710 Circadian rhythm hsa04713 Circadian entrainment hsa04714 Thermogenesis hsa04720 Long-term potentiation hsa04721 Synaptic vesicle cycle hsa04722 Neurotrophin signaling pathway hsa04723 Retrograde endocannabinoid signaling hsa04724 Glutamatergic synapse hsa04725 Cholinergic synapse hsa04726 Serotonergic synapse hsa04727 GABAergic synapse hsa04728 Dopaminergic synapse hsa04730 Long-term depression hsa04740 Olfactory transduction hsa04742 Taste transduction hsa04744 Phototransduction hsa04750 Inflammatory mediator regulation of TRP channels hsa04810 Regulation of actin cytoskeleton hsa04910 Insulin signaling pathway hsa04911 Insulin secretion hsa04912 GnRH signaling pathway hsa04913 Ovarian steroidogenesis hsa04914 Progesterone-mediated oocyte maturation hsa04915 Estrogen signaling pathway hsa04916 Melanogenesis hsa04917 Prolactin signaling pathway hsa04918 Thyroid hormone synthesis hsa04919 Thyroid hormone signaling pathway hsa04920 Adipocytokine signaling pathway hsa04921 Oxytocin signaling pathway hsa04922 Glucagon signaling pathway hsa04923 Regulation of lipolysis in adipocytes hsa04924 Renin secretion hsa04925 Aldosterone synthesis and secretion hsa04926 Relaxin signaling pathway hsa04927 Cortisol synthesis and secretion hsa04928 Parathyroid hormone synthesis, secretion and action hsa04930 Type II diabetes mellitus hsa04931 Insulin resistance hsa04932 Non-alcoholic fatty liver disease (NAFLD) hsa04933 AGE-RAGE signaling pathway in diabetic complications hsa04934 Cushing's syndrome hsa04940 Type I diabetes mellitus hsa04950 Maturity onset diabetes of the young hsa04960 Aldosterone-regulated sodium reabsorption hsa04961 Endocrine and other factor-regulated calcium reabsorption hsa04962 Vasopressin-regulated water reabsorption hsa04964 Proximal tubule bicarbonate reclamation hsa04966 Collecting duct acid secretion hsa04970 Salivary secretion hsa04971 Gastric acid secretion hsa04972 Pancreatic secretion hsa04973 Carbohydrate digestion and absorption hsa04974 Protein digestion and absorption hsa04975 Fat digestion and absorption hsa04976 Bile secretion hsa04977 Vitamin digestion and absorption hsa04978 Mineral absorption hsa04979 Cholesterol metabolism hsa05010 Alzheimer's disease hsa05012 Parkinson's disease hsa05014 Amyotrophic lateral sclerosis (ALS) hsa05016 Huntington's disease hsa05020 Prion diseases hsa05030 Cocaine addiction hsa05031 Amphetamine addiction hsa05032 Morphine addiction hsa05033 Nicotine addiction hsa05034 Alcoholism hsa05100 Bacterial invasion of epithelial cells hsa05110 Vibrio cholerae infection hsa05120 Epithelial cell signaling in Helicobacter pylori infection hsa05130 Pathogenic Escherichia coli infection hsa05131 Shigellosis hsa05132 Salmonella infection hsa05133 Pertussis hsa05134 Legionellosis hsa05140 Leishmaniasis hsa05142 Chagas disease (American trypanosomiasis) hsa05143 African trypanosomiasis hsa05144 Malaria hsa05145 Toxoplasmosis hsa05146 Amoebiasis hsa05150 Staphylococcus aureus infection hsa05152 Tuberculosis hsa05160 Hepatitis C hsa05161 Hepatitis B hsa05162 Measles hsa05163 Human cytomegalovirus infection hsa05164 Influenza A hsa05165 Human papillomavirus infection hsa05166 HTLV-I infection hsa05167 Kaposi's sarcoma-associated herpesvirus infection hsa05168 Herpes simplex infection hsa05169 Epstein-Barr virus infection hsa05200 Pathways in cancer hsa05202 Transcriptional misregulation in cancer hsa05203 Viral carcinogenesis hsa05204 Chemical carcinogenesis hsa05205 Proteoglycans in cancer hsa05206 MicroRNAs in cancer hsa05210 Colorectal cancer hsa05211 Renal cell carcinoma hsa05212 Pancreatic cancer hsa05213 Endometrial cancer hsa05214 Glioma hsa05215 Prostate cancer hsa05216 Thyroid cancer hsa05217 Basal cell carcinoma hsa05218 Melanoma hsa05219 Bladder cancer hsa05220 Chronic myeloid leukemia hsa05221 Acute myeloid leukemia hsa05222 Small cell lung cancer hsa05223 Non-small cell lung cancer hsa05224 Breast cancer hsa05225 Hepatocellular carcinoma hsa05226 Gastric cancer hsa05230 Central carbon metabolism in cancer hsa05231 Choline metabolism in cancer hsa05310 Asthma hsa05320 Autoimmune thyroid disease hsa05321 Inflammatory bowel disease (IBD) hsa05322 Systemic lupus erythematosus hsa05323 Rheumatoid arthritis hsa05330 Allograft rejection hsa05332 Graft-versus-host disease hsa05340 Primary immunodeficiency hsa05410 Hypertrophic cardiomyopathy (HCM) hsa05412 Arrhythmogenic right ventricular cardiomyopathy (ARVC) hsa05414 Dilated cardiomyopathy (DCM) hsa05416 Viral myocarditis hsa05418 Fluid shear stress and atherosclerosis