Mercurial > repos > proteore > proteore_maps_visualization
view tool-data/mmu_pathways.loc.sample @ 5:4a3056be0774 draft
planemo upload commit b8671ffe2e12dc6612b971a3e6e1dc71496aefd0
| author | proteore |
|---|---|
| date | Fri, 24 Jan 2020 05:20:10 -0500 |
| parents | 9845dc9c7323 |
| children |
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#value name mmu00010 Glycolysis / Gluconeogenesis mmu00020 Citrate cycle (TCA cycle) mmu00030 Pentose phosphate pathway mmu00040 Pentose and glucuronate interconversions mmu00051 Fructose and mannose metabolism mmu00052 Galactose metabolism mmu00053 Ascorbate and aldarate metabolism mmu00061 Fatty acid biosynthesis mmu00062 Fatty acid elongation mmu00071 Fatty acid degradation mmu00072 Synthesis and degradation of ketone bodies mmu00100 Steroid biosynthesis mmu00120 Primary bile acid biosynthesis mmu00130 Ubiquinone and other terpenoid-quinone biosynthesis mmu00140 Steroid hormone biosynthesis mmu00190 Oxidative phosphorylation mmu00220 Arginine biosynthesis mmu00230 Purine metabolism mmu00232 Caffeine metabolism mmu00240 Pyrimidine metabolism mmu00250 Alanine, aspartate and glutamate metabolism mmu00260 Glycine, serine and threonine metabolism mmu00270 Cysteine and methionine metabolism mmu00280 Valine, leucine and isoleucine degradation mmu00290 Valine, leucine and isoleucine biosynthesis mmu00310 Lysine degradation mmu00330 Arginine and proline metabolism mmu00340 Histidine metabolism mmu00350 Tyrosine metabolism mmu00360 Phenylalanine metabolism mmu00380 Tryptophan metabolism mmu00400 Phenylalanine, tyrosine and tryptophan biosynthesis mmu00410 beta-Alanine metabolism mmu00430 Taurine and hypotaurine metabolism mmu00440 Phosphonate and phosphinate metabolism mmu00450 Selenocompound metabolism mmu00471 D-Glutamine and D-glutamate metabolism mmu00472 D-Arginine and D-ornithine metabolism mmu00480 Glutathione metabolism mmu00500 Starch and sucrose metabolism mmu00510 N-Glycan biosynthesis mmu00511 Other glycan degradation mmu00512 Mucin type O-glycan biosynthesis mmu00514 Other types of O-glycan biosynthesis mmu00515 Mannose type O-glycan biosynthesis mmu00520 Amino sugar and nucleotide sugar metabolism mmu00524 Neomycin, kanamycin and gentamicin biosynthesis mmu00531 Glycosaminoglycan degradation mmu00532 Glycosaminoglycan biosynthesis mmu00533 Glycosaminoglycan biosynthesis mmu00534 Glycosaminoglycan biosynthesis mmu00561 Glycerolipid metabolism mmu00562 Inositol phosphate metabolism mmu00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis mmu00564 Glycerophospholipid metabolism mmu00565 Ether lipid metabolism mmu00590 Arachidonic acid metabolism mmu00591 Linoleic acid metabolism mmu00592 alpha-Linolenic acid metabolism mmu00600 Sphingolipid metabolism mmu00601 Glycosphingolipid biosynthesis mmu00603 Glycosphingolipid biosynthesis mmu00604 Glycosphingolipid biosynthesis mmu00620 Pyruvate metabolism mmu00630 Glyoxylate and dicarboxylate metabolism mmu00640 Propanoate metabolism mmu00650 Butanoate metabolism mmu00670 One carbon pool by folate mmu00730 Thiamine metabolism mmu00740 Riboflavin metabolism mmu00750 Vitamin B6 metabolism mmu00760 Nicotinate and nicotinamide metabolism mmu00770 Pantothenate and CoA biosynthesis mmu00780 Biotin metabolism mmu00785 Lipoic acid metabolism mmu00790 Folate biosynthesis mmu00830 Retinol metabolism mmu00860 Porphyrin and chlorophyll metabolism mmu00900 Terpenoid backbone biosynthesis mmu00910 Nitrogen metabolism mmu00920 Sulfur metabolism mmu00970 Aminoacyl-tRNA biosynthesis mmu00980 Metabolism of xenobiotics by cytochrome P450 mmu00982 Drug metabolism mmu00983 Drug metabolism mmu01040 Biosynthesis of unsaturated fatty acids mmu01100 Metabolic pathways mmu01200 Carbon metabolism mmu01210 2-Oxocarboxylic acid metabolism mmu01212 Fatty acid metabolism mmu01230 Biosynthesis of amino acids mmu01521 EGFR tyrosine kinase inhibitor resistance mmu01522 Endocrine resistance mmu01523 Antifolate resistance mmu01524 Platinum drug resistance mmu02010 ABC transporters mmu03008 Ribosome biogenesis in eukaryotes mmu03010 Ribosome mmu03013 RNA transport mmu03015 mRNA surveillance pathway mmu03018 RNA degradation mmu03020 RNA polymerase mmu03022 Basal transcription factors mmu03030 DNA replication mmu03040 Spliceosome mmu03050 Proteasome mmu03060 Protein export mmu03320 PPAR signaling pathway mmu03410 Base excision repair mmu03420 Nucleotide excision repair mmu03430 Mismatch repair mmu03440 Homologous recombination mmu03450 Non-homologous end-joining mmu03460 Fanconi anemia pathway mmu04010 MAPK signaling pathway mmu04012 ErbB signaling pathway mmu04014 Ras signaling pathway mmu04015 Rap1 signaling pathway mmu04020 Calcium signaling pathway mmu04022 cGMP-PKG signaling pathway mmu04024 cAMP signaling pathway mmu04060 Cytokine-cytokine receptor interaction mmu04062 Chemokine signaling pathway mmu04064 NF-kappa B signaling pathway mmu04066 HIF-1 signaling pathway mmu04068 FoxO signaling pathway mmu04070 Phosphatidylinositol signaling system mmu04071 Sphingolipid signaling pathway mmu04072 Phospholipase D signaling pathway mmu04080 Neuroactive ligand-receptor interaction mmu04110 Cell cycle mmu04114 Oocyte meiosis mmu04115 p53 signaling pathway mmu04120 Ubiquitin mediated proteolysis mmu04122 Sulfur relay system mmu04130 SNARE interactions in vesicular transport mmu04136 Autophagy mmu04137 Mitophagy mmu04140 Autophagy mmu04141 Protein processing in endoplasmic reticulum mmu04142 Lysosome mmu04144 Endocytosis mmu04145 Phagosome mmu04146 Peroxisome mmu04150 mTOR signaling pathway mmu04151 PI3K-Akt signaling pathway mmu04152 AMPK signaling pathway mmu04210 Apoptosis mmu04211 Longevity regulating pathway mmu04213 Longevity regulating pathway mmu04215 Apoptosis mmu04216 Ferroptosis mmu04217 Necroptosis mmu04218 Cellular senescence mmu04260 Cardiac muscle contraction mmu04261 Adrenergic signaling in cardiomyocytes mmu04270 Vascular smooth muscle contraction mmu04310 Wnt signaling pathway mmu04330 Notch signaling pathway mmu04340 Hedgehog signaling pathway mmu04350 TGF-beta signaling pathway mmu04360 Axon guidance mmu04370 VEGF signaling pathway mmu04371 Apelin signaling pathway mmu04380 Osteoclast differentiation mmu04390 Hippo signaling pathway mmu04392 Hippo signaling pathway mmu04510 Focal adhesion mmu04512 ECM-receptor interaction mmu04514 Cell adhesion molecules (CAMs) mmu04520 Adherens junction mmu04530 Tight junction mmu04540 Gap junction mmu04550 Signaling pathways regulating pluripotency of stem cells mmu04610 Complement and coagulation cascades mmu04611 Platelet activation mmu04612 Antigen processing and presentation mmu04614 Renin-angiotensin system mmu04620 Toll-like receptor signaling pathway mmu04621 NOD-like receptor signaling pathway mmu04622 RIG-I-like receptor signaling pathway mmu04623 Cytosolic DNA-sensing pathway mmu04625 C-type lectin receptor signaling pathway mmu04630 Jak-STAT signaling pathway mmu04640 Hematopoietic cell lineage mmu04650 Natural killer cell mediated cytotoxicity mmu04657 IL-17 signaling pathway mmu04658 Th1 and Th2 cell differentiation mmu04659 Th17 cell differentiation mmu04660 T cell receptor signaling pathway mmu04662 B cell receptor signaling pathway mmu04664 Fc epsilon RI signaling pathway mmu04666 Fc gamma R-mediated phagocytosis mmu04668 TNF signaling pathway mmu04670 Leukocyte transendothelial migration mmu04672 Intestinal immune network for IgA production mmu04710 Circadian rhythm mmu04713 Circadian entrainment mmu04714 Thermogenesis mmu04720 Long-term potentiation mmu04721 Synaptic vesicle cycle mmu04722 Neurotrophin signaling pathway mmu04723 Retrograde endocannabinoid signaling mmu04724 Glutamatergic synapse mmu04725 Cholinergic synapse mmu04726 Serotonergic synapse mmu04727 GABAergic synapse mmu04728 Dopaminergic synapse mmu04730 Long-term depression mmu04740 Olfactory transduction mmu04742 Taste transduction mmu04744 Phototransduction mmu04750 Inflammatory mediator regulation of TRP channels mmu04810 Regulation of actin cytoskeleton mmu04910 Insulin signaling pathway mmu04911 Insulin secretion mmu04912 GnRH signaling pathway mmu04913 Ovarian steroidogenesis mmu04914 Progesterone-mediated oocyte maturation mmu04915 Estrogen signaling pathway mmu04916 Melanogenesis mmu04917 Prolactin signaling pathway mmu04918 Thyroid hormone synthesis mmu04919 Thyroid hormone signaling pathway mmu04920 Adipocytokine signaling pathway mmu04921 Oxytocin signaling pathway mmu04922 Glucagon signaling pathway mmu04923 Regulation of lipolysis in adipocytes mmu04924 Renin secretion mmu04925 Aldosterone synthesis and secretion mmu04926 Relaxin signaling pathway mmu04927 Cortisol synthesis and secretion mmu04928 Parathyroid hormone synthesis, secretion and action mmu04930 Type II diabetes mellitus mmu04931 Insulin resistance mmu04932 Non-alcoholic fatty liver disease (NAFLD) mmu04933 AGE-RAGE signaling pathway in diabetic complications mmu04934 Cushing's syndrome mmu04940 Type I diabetes mellitus mmu04950 Maturity onset diabetes of the young mmu04960 Aldosterone-regulated sodium reabsorption mmu04961 Endocrine and other factor-regulated calcium reabsorption mmu04962 Vasopressin-regulated water reabsorption mmu04964 Proximal tubule bicarbonate reclamation mmu04966 Collecting duct acid secretion mmu04970 Salivary secretion mmu04971 Gastric acid secretion mmu04972 Pancreatic secretion mmu04973 Carbohydrate digestion and absorption mmu04974 Protein digestion and absorption mmu04975 Fat digestion and absorption mmu04976 Bile secretion mmu04977 Vitamin digestion and absorption mmu04978 Mineral absorption mmu04979 Cholesterol metabolism mmu05010 Alzheimer's disease mmu05012 Parkinson's disease mmu05014 Amyotrophic lateral sclerosis (ALS) mmu05016 Huntington's disease mmu05020 Prion diseases mmu05030 Cocaine addiction mmu05031 Amphetamine addiction mmu05032 Morphine addiction mmu05033 Nicotine addiction mmu05034 Alcoholism mmu05100 Bacterial invasion of epithelial cells mmu05132 Salmonella infection mmu05133 Pertussis mmu05134 Legionellosis mmu05140 Leishmaniasis mmu05142 Chagas disease (American trypanosomiasis) mmu05143 African trypanosomiasis mmu05144 Malaria mmu05145 Toxoplasmosis mmu05146 Amoebiasis mmu05150 Staphylococcus aureus infection mmu05152 Tuberculosis mmu05160 Hepatitis C mmu05161 Hepatitis B mmu05162 Measles mmu05163 Human cytomegalovirus infection mmu05164 Influenza A mmu05165 Human papillomavirus infection mmu05166 HTLV-I infection mmu05167 Kaposi's sarcoma-associated herpesvirus infection mmu05168 Herpes simplex infection mmu05169 Epstein-Barr virus infection mmu05200 Pathways in cancer mmu05202 Transcriptional misregulation in cancer mmu05203 Viral carcinogenesis mmu05204 Chemical carcinogenesis mmu05205 Proteoglycans in cancer mmu05206 MicroRNAs in cancer mmu05210 Colorectal cancer mmu05211 Renal cell carcinoma mmu05212 Pancreatic cancer mmu05213 Endometrial cancer mmu05214 Glioma mmu05215 Prostate cancer mmu05216 Thyroid cancer mmu05217 Basal cell carcinoma mmu05218 Melanoma mmu05219 Bladder cancer mmu05220 Chronic myeloid leukemia mmu05221 Acute myeloid leukemia mmu05222 Small cell lung cancer mmu05223 Non-small cell lung cancer mmu05224 Breast cancer mmu05225 Hepatocellular carcinoma mmu05226 Gastric cancer mmu05230 Central carbon metabolism in cancer mmu05231 Choline metabolism in cancer mmu05310 Asthma mmu05320 Autoimmune thyroid disease mmu05321 Inflammatory bowel disease (IBD) mmu05322 Systemic lupus erythematosus mmu05323 Rheumatoid arthritis mmu05330 Allograft rejection mmu05332 Graft-versus-host disease mmu05340 Primary immunodeficiency mmu05410 Hypertrophic cardiomyopathy (HCM) mmu05412 Arrhythmogenic right ventricular cardiomyopathy (ARVC) mmu05414 Dilated cardiomyopathy (DCM) mmu05416 Viral myocarditis mmu05418 Fluid shear stress and atherosclerosis