# HG changeset patch # User pstew # Date 1487367510 18000 # Node ID 482c23a5abfe465e4afa5186e2282411c96f2921 # Parent 7726adcf91c65c6179a56d9615f86b0a05b3a0be Uploaded Python wrapper diff -r 7726adcf91c6 -r 482c23a5abfe escape_excel_wrapper.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/escape_excel_wrapper.py Fri Feb 17 16:38:30 2017 -0500 @@ -0,0 +1,23 @@ +import os +import sys + +paranoid = sys.argv[1] +escape_dates = sys.argv[2] +escape_scinot = sys.argv[3] +escape_leadzero = sys.argv[4] +input_file = sys.argv[5] +output_file = sys.argv[6] + +cmd = 'perl /home/bornea/galaxy-apostl-docker/tools/escapeExcel/escape_excel.pl' +if paranoid == 'TRUE': + cmd = cmd + ' --paranoid' +if escape_dates == 'TRUE': + cmd = cmd + ' --no-dates' +if escape_scinot == 'TRUE': + cmd = cmd + ' --no-sci' +if escape_leadzero== 'TRUE': + cmd = cmd + ' --no-zeroes' + +cmd = cmd + ' ' + input_file + ' ' + output_file + +os.system(cmd)